3gg7: Difference between revisions

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==Crystal structure of an uncharacterized metalloprotein from Deinococcus radiodurans==
==Crystal structure of an uncharacterized metalloprotein from Deinococcus radiodurans==
<StructureSection load='3gg7' size='340' side='right' caption='[[3gg7]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
<StructureSection load='3gg7' size='340' side='right'caption='[[3gg7]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3gg7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"micrococcus_radiodurans"_raj_et_al._1960 "micrococcus radiodurans" raj et al. 1960]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GG7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GG7 FirstGlance]. <br>
<table><tr><td colspan='2'>[[3gg7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Deinococcus_radiodurans Deinococcus radiodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GG7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GG7 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">DR_C0006 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1299 "Micrococcus radiodurans" Raj et al. 1960])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gg7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gg7 OCA], [http://pdbe.org/3gg7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3gg7 RCSB], [http://www.ebi.ac.uk/pdbsum/3gg7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3gg7 ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/3gg7 TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gg7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gg7 OCA], [https://pdbe.org/3gg7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gg7 RCSB], [https://www.ebi.ac.uk/pdbsum/3gg7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gg7 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3gg7 TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q9RZH8_DEIRA Q9RZH8_DEIRA]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gg/3gg7_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gg/3gg7_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Micrococcus radiodurans raj et al. 1960]]
[[Category: Deinococcus radiodurans]]
[[Category: Almo, S C]]
[[Category: Large Structures]]
[[Category: Bain, K T]]
[[Category: Almo SC]]
[[Category: Bonanno, J B]]
[[Category: Bain KT]]
[[Category: Burley, S K]]
[[Category: Bonanno JB]]
[[Category: Dickey, M]]
[[Category: Burley SK]]
[[Category: Structural genomic]]
[[Category: Dickey M]]
[[Category: Romero, R]]
[[Category: Romero R]]
[[Category: Sauder, J M]]
[[Category: Sauder JM]]
[[Category: Tang, B K]]
[[Category: Tang BK]]
[[Category: Wasserman, S]]
[[Category: Wasserman S]]
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
[[Category: Plasmid]]
[[Category: PSI, Protein structure initiative]]
[[Category: Unknown function]]

Latest revision as of 12:54, 21 February 2024

Crystal structure of an uncharacterized metalloprotein from Deinococcus radioduransCrystal structure of an uncharacterized metalloprotein from Deinococcus radiodurans

Structural highlights

3gg7 is a 1 chain structure with sequence from Deinococcus radiodurans. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.5Å
Ligands:, , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q9RZH8_DEIRA

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3gg7, resolution 1.50Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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