3gg1: Difference between revisions

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-{{STRUCTURE_3gg1|  PDB=3gg1  |  SCENE=  }}
-===Klebsiella pneumoniae BlrP1 pH 8.0 calcium/cy-diGMP complex===
-{{ABSTRACT_PUBMED_19536266}}
-==About this Structure==
+==Klebsiella pneumoniae BlrP1 pH 8.0 calcium/cy-diGMP complex==
-[[3gg1]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Klebsiella_pneumoniae_subsp._pneumoniae_mgh_78578 Klebsiella pneumoniae subsp. pneumoniae mgh 78578]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GG1 OCA].
+<StructureSection load='3gg1' size='340' side='right'caption='[[3gg1]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[3gg1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Klebsiella_pneumoniae_subsp._pneumoniae_MGH_78578 Klebsiella pneumoniae subsp. pneumoniae MGH 78578]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GG1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GG1 FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=C2E:9,9-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d 3,2-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)'>C2E</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gg1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gg1 OCA], [https://pdbe.org/3gg1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gg1 RCSB], [https://www.ebi.ac.uk/pdbsum/3gg1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gg1 ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/A6T8V8_KLEP7 A6T8V8_KLEP7]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gg/3gg1_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gg1 ConSurf].
+<div style="clear:both"></div>
-==Reference==
+==See Also==
-<ref group="xtra">PMID:019536266</ref><references group="xtra"/><references/>
+*[[Phosphodiesterase 3D structures|Phosphodiesterase 3D structures]]
-[[Category: Klebsiella pneumoniae subsp. pneumoniae mgh 78578]]
+__TOC__
-[[Category: Barends, T.]]
+</StructureSection>
-[[Category: Beitlich, T.]]
+[[Category: Klebsiella pneumoniae subsp. pneumoniae MGH 78578]]
-[[Category: Gomelsky, M.]]
+[[Category: Large Structures]]
-[[Category: Griese, J.]]
+[[Category: Barends T]]
-[[Category: Hartmann, E.]]
+[[Category: Beitlich T]]
-[[Category: Kirienko, N.]]
+[[Category: Gomelsky M]]
-[[Category: Reinstein, J.]]
+[[Category: Griese J]]
-[[Category: Ryjenkov, D.]]
+[[Category: Hartmann E]]
-[[Category: Schlichting, I.]]
+[[Category: Kirienko N]]
-[[Category: Shoeman, R.]]
+[[Category: Reinstein J]]
-[[Category: Bluf domain]]
+[[Category: Ryjenkov D]]
-[[Category: Eal domain]]
+[[Category: Schlichting I]]
-[[Category: Hydrolase]]
+[[Category: Shoeman R]]
-[[Category: Signaling protein]]
-[[Category: Tim-barrel]]