3fuv: Difference between revisions

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{{Seed}}
[[Image:3fuv.png|left|200px]]


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==Apo-form of T. thermophilus 16S rRNA A1518 and A1519 methyltransferase (KsgA) in space group P43212==
The line below this paragraph, containing "STRUCTURE_3fuv", creates the "Structure Box" on the page.
<StructureSection load='3fuv' size='340' side='right'caption='[[3fuv]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3fuv]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FUV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FUV FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fuv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fuv OCA], [https://pdbe.org/3fuv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fuv RCSB], [https://www.ebi.ac.uk/pdbsum/3fuv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fuv ProSAT]</span></td></tr>
{{STRUCTURE_3fuv| PDB=3fuv |  SCENE= }}
</table>
== Function ==
[https://www.uniprot.org/uniprot/RSMA_THET8 RSMA_THET8] Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.[HAMAP-Rule:MF_00607]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fu/3fuv_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3fuv ConSurf].
<div style="clear:both"></div>


===Apo-form of T. thermophilus 16S rRNA A1518 and A1519 methyltransferase (KsgA) in space group P43212===
==See Also==
 
*[[Adenosine dimethyltransferase 3D structures|Adenosine dimethyltransferase 3D structures]]
 
__TOC__
<!--
</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_19285505}}, adds the Publication Abstract to the page
[[Category: Large Structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 19285505 is the PubMed ID number.
[[Category: Thermus thermophilus HB8]]
-->
[[Category: Belardinelli R]]
{{ABSTRACT_PUBMED_19285505}}
[[Category: Dahlberg AE]]
 
[[Category: Demirci H]]
==About this Structure==
[[Category: Gregory ST]]
3FUV is a 3 chains structure of sequences from [http://en.wikipedia.org/wiki/Thermus_thermophilus_hb8 Thermus thermophilus hb8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FUV OCA].
[[Category: Gualerzi C]]
 
[[Category: Jogl G]]
==Reference==
[[Category: Seri E]]
<ref group="xtra">PMID:19285505</ref><references group="xtra"/>
[[Category: Thermus thermophilus hb8]]
[[Category: Belardinelli, R.]]
[[Category: Dahlberg, A E.]]
[[Category: Demirci, H.]]
[[Category: Gregory, S T.]]
[[Category: Gualerzi, C.]]
[[Category: Jogl, G.]]
[[Category: Seri, E.]]
[[Category: 16s rrna methyltransferase]]
[[Category: Antibiotic resistance]]
[[Category: Dimethyltransferase]]
[[Category: Dual-specific methyltransferase]]
[[Category: Methyltransferase]]
[[Category: Rna-binding]]
[[Category: Rrna processing]]
[[Category: S-adenosyl-l-methionine]]
[[Category: Transferase]]
[[Category: Translation]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Apr 29 20:40:36 2009''

Latest revision as of 12:51, 21 February 2024

Apo-form of T. thermophilus 16S rRNA A1518 and A1519 methyltransferase (KsgA) in space group P43212Apo-form of T. thermophilus 16S rRNA A1518 and A1519 methyltransferase (KsgA) in space group P43212

Structural highlights

3fuv is a 3 chain structure with sequence from Thermus thermophilus HB8. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.95Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

RSMA_THET8 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.[HAMAP-Rule:MF_00607]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3fuv, resolution 1.95Å

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