3fu1: Difference between revisions

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-[[Image:3fu1.png|left|200px]]
-<!--
+==Crystal structure of the major pseudopilin from the type 2 secretion system of Vibrio cholerae==
-The line below this paragraph, containing "STRUCTURE_3fu1", creates the "Structure Box" on the page.
+<StructureSection load='3fu1' size='340' side='right'caption='[[3fu1]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[3fu1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FU1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FU1 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-{{STRUCTURE_3fu1|  PDB=3fu1  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fu1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fu1 OCA], [https://pdbe.org/3fu1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fu1 RCSB], [https://www.ebi.ac.uk/pdbsum/3fu1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fu1 ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/GSPG_VIBCH GSPG_VIBCH] Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. Required for secretion of cholera toxin through the outer membrane.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fu/3fu1_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3fu1 ConSurf].
+<div style="clear:both"></div>
-===Crystal structure of the major pseudopilin from the type 2 secretion system of Vibrio cholerae===
+==See Also==
+*[[Pseudopilin|Pseudopilin]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_19640838}}, adds the Publication Abstract to the page
+[[Category: Large Structures]]
-(as it appears on PubMed at http://www.pubmed.gov), where 19640838 is the PubMed ID number.
--->
-{{ABSTRACT_PUBMED_19640838}}
-==About this Structure==
-[[3fu1]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FU1 OCA].
-==Reference==
-<ref group="xtra">PMID:019640838</ref><references group="xtra"/>
 [[Category: Vibrio cholerae]]
-[[Category: Gray, M D.]]
+[[Category: Gray MD]]
-[[Category: Hol, W G.J.]]
+[[Category: Hol WGJ]]
-[[Category: Korotkov, K V.]]
+[[Category: Korotkov KV]]
-[[Category: Kreger, A.]]
+[[Category: Kreger A]]
-[[Category: Sandkvist, M.]]
+[[Category: Sandkvist M]]
-[[Category: Turley, S.]]
+[[Category: Turley S]]
-[[Category: Complex]]
-[[Category: General secretory pathway]]
-[[Category: Major pilin]]
-[[Category: Methylation]]
-[[Category: Protein transport]]
-[[Category: Transport]]