3eod: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-[[Image:3eod.png|left|200px]]
-{{STRUCTURE_3eod|  PDB=3eod  |  SCENE=  }}
+==Crystal structure of N-terminal domain of E. coli RssB==
+<StructureSection load='3eod' size='340' side='right'caption='[[3eod]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
-===Crystal structure of N-terminal domain of E. coli RssB===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[3eod]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EOD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EOD FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
-==About this Structure==
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3eod FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3eod OCA], [https://pdbe.org/3eod PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3eod RCSB], [https://www.ebi.ac.uk/pdbsum/3eod PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3eod ProSAT]</span></td></tr>
-[[3eod]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_k-12 Escherichia coli k-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EOD OCA].
+</table>
-[[Category: Escherichia coli k-12]]
+== Function ==
-[[Category: Baker, T A.]]
+[https://www.uniprot.org/uniprot/RSSB_ECOLI RSSB_ECOLI] Regulates the turnover of the sigma S factor (RpoS) by promoting its proteolysis in exponentially growing cells. Acts by binding and delivering RpoS to the ClpXP protease. RssB is not co-degraded with RpoS, but is released from the complex and can initiate a new cycle of RpoS recognition and degradation. In stationary phase, could also act as an anti-sigma factor and reduce the ability of RpoS to activate gene expression. Is also involved in the regulation of the mRNA polyadenylation pathway during stationary phase, probably by maintaining the association of PcnB with the degradosome.[HAMAP-Rule:MF_00958]<ref>PMID:10672187</ref> <ref>PMID:11442836</ref> <ref>PMID:19767441</ref> <ref>PMID:20472786</ref> <ref>PMID:8635466</ref> <ref>PMID:8637901</ref>
-[[Category: Grant, R A.]]
+== Evolutionary Conservation ==
-[[Category: Levchenko, I.]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: Sauer, R T.]]
+Check<jmol>
-[[Category: Phosphoprotein]]
+  <jmolCheckbox>
-[[Category: Response regulator]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eo/3eod_consurf.spt"</scriptWhenChecked>
-[[Category: Signaling protein]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: Two-component regulatory system]]
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3eod ConSurf].
+<div style="clear:both"></div>
+== References ==
+<references/>
+__TOC__
+</StructureSection>
+[[Category: Escherichia coli K-12]]
+[[Category: Large Structures]]
+[[Category: Baker TA]]
+[[Category: Grant RA]]
+[[Category: Levchenko I]]
+[[Category: Sauer RT]]