3eni: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:3eni.png|left|200px]]


<!--
==Crystal structure of the Fenna-Matthews-Olson Protein from Chlorobaculum Tepidum==
The line below this paragraph, containing "STRUCTURE_3eni", creates the "Structure Box" on the page.
<StructureSection load='3eni' size='340' side='right'caption='[[3eni]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3eni]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Chlorobaculum_tepidum Chlorobaculum tepidum]. This structure supersedes the now removed PDB entries [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1ksa 1ksa] and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1m50 1m50]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ENI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ENI FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BCL:BACTERIOCHLOROPHYLL+A'>BCL</scene></td></tr>
{{STRUCTURE_3eni|  PDB=3eni  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3eni FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3eni OCA], [https://pdbe.org/3eni PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3eni RCSB], [https://www.ebi.ac.uk/pdbsum/3eni PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3eni ProSAT]</span></td></tr>
 
</table>
===Crystal structure of the Fenna-Matthews-Olson Protein from Chlorobaculum Tepidum===
== Function ==
 
[https://www.uniprot.org/uniprot/BCPA_CHLTE BCPA_CHLTE] Intermediary in the transfer of excitation energy from the chlorophyll to the reaction centers.
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_19437128}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 19437128 is the PubMed ID number.
  <jmolCheckbox>
-->
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/en/3eni_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_19437128}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
[[3eni]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Chlorobaculum_tepidum Chlorobaculum tepidum]. This structure supersedes the now removed PDB entries and [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1m50 1m50]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ENI OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3eni ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
<ref group="xtra">PMID:19437128</ref><ref group="xtra">PMID:16245093</ref><ref group="xtra">PMID:9268671</ref><references group="xtra"/>
</StructureSection>
[[Category: Chlorobaculum tepidum]]
[[Category: Chlorobaculum tepidum]]
[[Category: Allen, J P.]]
[[Category: Large Structures]]
[[Category: Blankenship, R.]]
[[Category: Allen JP]]
[[Category: Camara-Artigas, A.]]
[[Category: Blankenship R]]
[[Category: Tronrud, D.]]
[[Category: Camara-Artigas A]]
[[Category: Bacteriochlorophyll]]
[[Category: Tronrud D]]
[[Category: Beta sheet]]
[[Category: Chlorophyll]]
[[Category: Chromophore]]
[[Category: Electron transport]]
[[Category: Gamma turn]]
[[Category: Magnesium]]
[[Category: Metal-binding]]
[[Category: Photosynthesis]]
[[Category: Reaction center]]
[[Category: Transport]]

Latest revision as of 12:48, 21 February 2024

Crystal structure of the Fenna-Matthews-Olson Protein from Chlorobaculum TepidumCrystal structure of the Fenna-Matthews-Olson Protein from Chlorobaculum Tepidum

Structural highlights

3eni is a 2 chain structure with sequence from Chlorobaculum tepidum. This structure supersedes the now removed PDB entries 1ksa and 1m50. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.2Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

BCPA_CHLTE Intermediary in the transfer of excitation energy from the chlorophyll to the reaction centers.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3eni, resolution 2.20Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA