3eaq: Difference between revisions

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{{Seed}}
[[Image:3eaq.png|left|200px]]


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==Novel dimerization motif in the DEAD box RNA helicase Hera form 2, complete dimer, symmetric==
The line below this paragraph, containing "STRUCTURE_3eaq", creates the "Structure Box" on the page.
<StructureSection load='3eaq' size='340' side='right'caption='[[3eaq]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3eaq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB27 Thermus thermophilus HB27]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EAQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EAQ FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
{{STRUCTURE_3eaq|  PDB=3eaq |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3eaq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3eaq OCA], [https://pdbe.org/3eaq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3eaq RCSB], [https://www.ebi.ac.uk/pdbsum/3eaq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3eaq ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q72GF3_THET2 Q72GF3_THET2]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ea/3eaq_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3eaq ConSurf].
<div style="clear:both"></div>


===Novel dimerization motif in the DEAD box RNA helicase Hera form 2, complete dimer, symmetric===
==See Also==
 
*[[ATPase 3D structures|ATPase 3D structures]]
 
*[[Helicase 3D structures|Helicase 3D structures]]
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The line below this paragraph, {{ABSTRACT_PUBMED_19050012}}, adds the Publication Abstract to the page
</StructureSection>
(as it appears on PubMed at http://www.pubmed.gov), where 19050012 is the PubMed ID number.
[[Category: Large Structures]]
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[[Category: Thermus thermophilus HB27]]
{{ABSTRACT_PUBMED_19050012}}
[[Category: Klostermeier D]]
 
[[Category: Rudolph MG]]
==About this Structure==
3EAQ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EAQ OCA].
 
==Reference==
A novel dimerization motif in the C-terminal domain of the Thermus thermophilus DEAD box helicase Hera confers substantial flexibility., Klostermeier D, Rudolph MG, Nucleic Acids Res. 2009 Feb;37(2):421-30. Epub 2008 Dec 2. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/19050012 19050012]
[[Category: Single protein]]
[[Category: Thermus thermophilus]]
[[Category: Pdbx_ordinal=, <PDBx:audit_author.]]
[[Category: Atp-binding]]
[[Category: Dead box rna helicase]]
[[Category: Dimer]]
[[Category: Helicase]]
[[Category: Hydrolase]]
[[Category: Nucleotide-binding]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 11 20:09:34 2009''

Latest revision as of 12:46, 21 February 2024

Novel dimerization motif in the DEAD box RNA helicase Hera form 2, complete dimer, symmetricNovel dimerization motif in the DEAD box RNA helicase Hera form 2, complete dimer, symmetric

Structural highlights

3eaq is a 2 chain structure with sequence from Thermus thermophilus HB27. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.3Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q72GF3_THET2

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3eaq, resolution 2.30Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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