3e8b: Difference between revisions

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{{Seed}}
[[Image:3e8b.png|left|200px]]


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==Crystal Structure of the the open NaK channel- Rb+ complex==
The line below this paragraph, containing "STRUCTURE_3e8b", creates the "Structure Box" on the page.
<StructureSection load='3e8b' size='340' side='right'caption='[[3e8b]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3e8b]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_cereus Bacillus cereus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E8B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3E8B FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=RB:RUBIDIUM+ION'>RB</scene></td></tr>
{{STRUCTURE_3e8b| PDB=3e8b |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3e8b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3e8b OCA], [https://pdbe.org/3e8b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3e8b RCSB], [https://www.ebi.ac.uk/pdbsum/3e8b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3e8b ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q81HW2_BACCR Q81HW2_BACCR]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e8/3e8b_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3e8b ConSurf].
<div style="clear:both"></div>


===Crystal Structure of the the open NaK channel- Rb+ complex===
==See Also==
 
*[[Potassium channel 3D structures|Potassium channel 3D structures]]
 
__TOC__
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{{ABSTRACT_PUBMED_19098915}}
 
==About this Structure==
3E8B is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_cereus Bacillus cereus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3E8B OCA].
 
==Reference==
Structural analysis of ion selectivity in the NaK channel., Alam A, Jiang Y, Nat Struct Mol Biol. 2009 Jan;16(1):35-41. Epub 2008 Dec 21. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/19098915 19098915]
[[Category: Bacillus cereus]]
[[Category: Bacillus cereus]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Pdbx_ordinal=, <PDBx:audit_author.]]
[[Category: Alam A]]
[[Category: 2-transmembrane helix channel]]
[[Category: Jiang Y]]
[[Category: Ionic channel]]
[[Category: Membrane protein]]
[[Category: Non-selective cation channel]]
[[Category: Tetrameric cation channel family]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 21 20:04:30 2009''

Latest revision as of 12:45, 21 February 2024

Crystal Structure of the the open NaK channel- Rb+ complexCrystal Structure of the the open NaK channel- Rb+ complex

Structural highlights

3e8b is a 2 chain structure with sequence from Bacillus cereus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.7Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q81HW2_BACCR

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3e8b, resolution 1.70Å

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