3dm3: Difference between revisions

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==Crystal structure of a domain of a Replication factor A protein, from Methanocaldococcus jannaschii. NorthEast Structural Genomics target MjR118E==
==Crystal structure of a domain of a Replication factor A protein, from Methanocaldococcus jannaschii. NorthEast Structural Genomics target MjR118E==
<StructureSection load='3dm3' size='340' side='right' caption='[[3dm3]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
<StructureSection load='3dm3' size='340' side='right'caption='[[3dm3]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3dm3]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_43067 Atcc 43067]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DM3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DM3 FirstGlance]. <br>
<table><tr><td colspan='2'>[[3dm3]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DM3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DM3 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">rpa, MJ1159 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2190 ATCC 43067])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3dm3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dm3 OCA], [http://pdbe.org/3dm3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3dm3 RCSB], [http://www.ebi.ac.uk/pdbsum/3dm3 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3dm3 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dm3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dm3 OCA], [https://pdbe.org/3dm3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dm3 RCSB], [https://www.ebi.ac.uk/pdbsum/3dm3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dm3 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/RPA_METJA RPA_METJA]] Probably plays an essential for replication of the chromosome, DNA recombination and repair (By similarity).  
[https://www.uniprot.org/uniprot/RPA_METJA RPA_METJA] Probably plays an essential for replication of the chromosome, DNA recombination and repair (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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==See Also==
==See Also==
*[[Single-stranded DNA-binding protein|Single-stranded DNA-binding protein]]
*[[Single-stranded DNA-binding protein 3D structures|Single-stranded DNA-binding protein 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Atcc 43067]]
[[Category: Large Structures]]
[[Category: Acton, T B]]
[[Category: Methanocaldococcus jannaschii]]
[[Category: Ciccosanti, C]]
[[Category: Acton TB]]
[[Category: Everett, J K]]
[[Category: Ciccosanti C]]
[[Category: Hunt, J F]]
[[Category: Everett JK]]
[[Category: Janjua, H]]
[[Category: Hunt JF]]
[[Category: Maglaqui, M]]
[[Category: Janjua H]]
[[Category: Montelione, G T]]
[[Category: Maglaqui M]]
[[Category: Structural genomic]]
[[Category: Montelione GT]]
[[Category: Nair, R]]
[[Category: Nair R]]
[[Category: Rost, B]]
[[Category: Rost B]]
[[Category: Seetharaman, J]]
[[Category: Seetharaman J]]
[[Category: Su, M]]
[[Category: Su M]]
[[Category: Tong, L]]
[[Category: Tong L]]
[[Category: Xiao, R]]
[[Category: Xiao R]]
[[Category: Dna damage]]
[[Category: Dna recombination and repair]]
[[Category: Dna repair]]
[[Category: Dna replication]]
[[Category: Dna-binding]]
[[Category: Metal-binding]]
[[Category: Nesg]]
[[Category: Probably plays an essential for replication of the chromosome]]
[[Category: PSI, Protein structure initiative]]
[[Category: Replication]]
[[Category: Replication factor a synonyms rp-a rf-a replication factor a protein 1 single-stranded dna-binding protein]]
[[Category: Zinc]]
[[Category: Zinc-finger]]

Latest revision as of 12:42, 21 February 2024

Crystal structure of a domain of a Replication factor A protein, from Methanocaldococcus jannaschii. NorthEast Structural Genomics target MjR118ECrystal structure of a domain of a Replication factor A protein, from Methanocaldococcus jannaschii. NorthEast Structural Genomics target MjR118E

Structural highlights

3dm3 is a 3 chain structure with sequence from Methanocaldococcus jannaschii. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.4Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

RPA_METJA Probably plays an essential for replication of the chromosome, DNA recombination and repair (By similarity).

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3dm3, resolution 2.40Å

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