3dal: Difference between revisions

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[[Image:3dal.png|left|200px]]


{{STRUCTURE_3dal|  PDB=3dal  |  SCENE=  }}
==Methyltransferase domain of human PR domain-containing protein 1==
 
<StructureSection load='3dal' size='340' side='right'caption='[[3dal]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
===Methyltransferase domain of human PR domain-containing protein 1===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3dal]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DAL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DAL FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dal FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dal OCA], [https://pdbe.org/3dal PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dal RCSB], [https://www.ebi.ac.uk/pdbsum/3dal PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dal ProSAT]</span></td></tr>
[[3dal]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DAL OCA].  
</table>
== Function ==
[https://www.uniprot.org/uniprot/PRDM1_HUMAN PRDM1_HUMAN] Transcriptional repressor that binds specifically to the PRDI element in the promoter of the beta-interferon gene. Drives the maturation of B-lymphocytes into Ig secreting cells.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/da/3dal_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dal ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Amaya, M F.]]
[[Category: Large Structures]]
[[Category: Antoshenko, T.]]
[[Category: Amaya MF]]
[[Category: Arrowsmith, C H.]]
[[Category: Antoshenko T]]
[[Category: Bochkarev, A.]]
[[Category: Arrowsmith CH]]
[[Category: Bountra, C.]]
[[Category: Bochkarev A]]
[[Category: Dong, A.]]
[[Category: Bountra C]]
[[Category: Edwards, A M.]]
[[Category: Dong A]]
[[Category: Loppnau, P.]]
[[Category: Edwards AM]]
[[Category: Min, J.]]
[[Category: Loppnau P]]
[[Category: Plotnikov, A N.]]
[[Category: Min J]]
[[Category: SGC, Structural Genomics Consortium.]]
[[Category: Plotnikov AN]]
[[Category: Weigelt, J.]]
[[Category: Weigelt J]]
[[Category: Wu, H.]]
[[Category: Wu H]]
[[Category: Zeng, H.]]
[[Category: Zeng H]]
[[Category: Dna binding protein]]
[[Category: Dna-binding]]
[[Category: Metal-binding]]
[[Category: Methyltransferase]]
[[Category: Nucleus]]
[[Category: Prdm1]]
[[Category: Repressor]]
[[Category: Sgc]]
[[Category: Structural genomic]]
[[Category: Structural genomics consortium]]
[[Category: Transcription]]
[[Category: Transcription regulation]]
[[Category: Transferase]]
[[Category: Zinc-finger]]

Latest revision as of 12:40, 21 February 2024

Methyltransferase domain of human PR domain-containing protein 1Methyltransferase domain of human PR domain-containing protein 1

Structural highlights

3dal is a 2 chain structure with sequence from Homo sapiens. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.65Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

PRDM1_HUMAN Transcriptional repressor that binds specifically to the PRDI element in the promoter of the beta-interferon gene. Drives the maturation of B-lymphocytes into Ig secreting cells.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3dal, resolution 1.65Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA