3d89: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:3d89.png|left|200px]]


<!--
==Crystal Structure of a Soluble Rieske Ferredoxin from Mus musculus==
The line below this paragraph, containing "STRUCTURE_3d89", creates the "Structure Box" on the page.
<StructureSection load='3d89' size='340' side='right'caption='[[3d89]], [[Resolution|resolution]] 2.07&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3d89]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D89 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3D89 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.071&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene></td></tr>
{{STRUCTURE_3d89|  PDB=3d89  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3d89 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d89 OCA], [https://pdbe.org/3d89 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3d89 RCSB], [https://www.ebi.ac.uk/pdbsum/3d89 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3d89 ProSAT]</span></td></tr>
 
</table>
===Crystal Structure of a Soluble Rieske Ferredoxin from Mus musculus===
== Function ==
 
[https://www.uniprot.org/uniprot/RFESD_MOUSE RFESD_MOUSE]
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_18703841}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 18703841 is the PubMed ID number.
  <jmolCheckbox>
-->
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d8/3d89_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_18703841}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
3D89 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D89 OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3d89 ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
X-ray structure of a soluble Rieske-type ferredoxin from Mus musculus., Levin EJ, Elsen NL, Seder KD, McCoy JG, Fox BG, Phillips GN Jr, Acta Crystallogr D Biol Crystallogr. 2008 Sep;64(Pt 9):933-40. Epub 2008, Aug 13. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18703841 18703841]
</StructureSection>
[[Category: Large Structures]]
[[Category: Mus musculus]]
[[Category: Mus musculus]]
[[Category: Single protein]]
[[Category: Bingman CA]]
[[Category: Bingman, C A.]]
[[Category: Elsen NL]]
[[Category: CESG, Center for Eukaryotic Structural Genomics.]]
[[Category: Fox BG]]
[[Category: Elsen, N L.]]
[[Category: Levin EJ]]
[[Category: Fox, B G.]]
[[Category: McCoy JG]]
[[Category: Jr., G N.Phillips.]]
[[Category: Phillips Jr GN]]
[[Category: Levin, E J.]]
[[Category: Seder KD]]
[[Category: McCoy, J G.]]
[[Category: Wesenberg GE]]
[[Category: Seder, K D.]]
[[Category: Wesenberg, G E.]]
[[Category: 2fe-2]]
[[Category: Alternative splicing]]
[[Category: Casp target]]
[[Category: Center for eukaryotic structural genomic]]
[[Category: Cesg]]
[[Category: Electron transport]]
[[Category: Iron]]
[[Category: Iron-sulfur]]
[[Category: Metal-binding]]
[[Category: Protein structure initiative]]
[[Category: Psi]]
[[Category: Rieske ferredoxin]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Oct 22 09:48:38 2008''

Latest revision as of 12:40, 21 February 2024

Crystal Structure of a Soluble Rieske Ferredoxin from Mus musculusCrystal Structure of a Soluble Rieske Ferredoxin from Mus musculus

Structural highlights

3d89 is a 1 chain structure with sequence from Mus musculus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.071Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

RFESD_MOUSE

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3d89, resolution 2.07Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA