3cz5: Difference between revisions

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==Crystal structure of two-component response regulator, LuxR family, from Aurantimonas sp. SI85-9A1==
==Crystal structure of two-component response regulator, LuxR family, from Aurantimonas sp. SI85-9A1==
<StructureSection load='3cz5' size='340' side='right' caption='[[3cz5]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
<StructureSection load='3cz5' size='340' side='right'caption='[[3cz5]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3cz5]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Aurantimonas_manganoxydans_si85-9a1 Aurantimonas manganoxydans si85-9a1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CZ5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3CZ5 FirstGlance]. <br>
<table><tr><td colspan='2'>[[3cz5]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Aurantimonas_manganoxydans_SI85-9A1 Aurantimonas manganoxydans SI85-9A1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CZ5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CZ5 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SI859A1_03491 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=287752 Aurantimonas manganoxydans SI85-9A1])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3cz5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cz5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3cz5 RCSB], [http://www.ebi.ac.uk/pdbsum/3cz5 PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3cz5 TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cz5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cz5 OCA], [https://pdbe.org/3cz5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cz5 RCSB], [https://www.ebi.ac.uk/pdbsum/3cz5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cz5 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3cz5 TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q1YEP2_AURMS Q1YEP2_AURMS]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cz/3cz5_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cz/3cz5_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cz5 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Response regulator|Response regulator]]
*[[Response regulator 3D structure|Response regulator 3D structure]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Aurantimonas manganoxydans si85-9a1]]
[[Category: Aurantimonas manganoxydans SI85-9A1]]
[[Category: Almo, S C]]
[[Category: Large Structures]]
[[Category: Burley, S K]]
[[Category: Almo SC]]
[[Category: Malashkevich, V N]]
[[Category: Burley SK]]
[[Category: Meyer, A]]
[[Category: Malashkevich VN]]
[[Category: Structural genomic]]
[[Category: Meyer A]]
[[Category: Sauder, J M]]
[[Category: Sauder JM]]
[[Category: Toro, R]]
[[Category: Toro R]]
[[Category: Wasserman, S R]]
[[Category: Wasserman SR]]
[[Category: Dna-binding]]
[[Category: Luxr family]]
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
[[Category: PSI, Protein structure initiative]]
[[Category: Response regulator]]
[[Category: Transcription]]
[[Category: Transcription regulation]]
[[Category: Transcription regulator]]

Latest revision as of 12:39, 21 February 2024

Crystal structure of two-component response regulator, LuxR family, from Aurantimonas sp. SI85-9A1Crystal structure of two-component response regulator, LuxR family, from Aurantimonas sp. SI85-9A1

Structural highlights

3cz5 is a 4 chain structure with sequence from Aurantimonas manganoxydans SI85-9A1. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.7Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q1YEP2_AURMS

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3cz5, resolution 2.70Å

Drag the structure with the mouse to rotate

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OCA