3cta: Difference between revisions

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[[Image:3cta.png|left|200px]]


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==Crystal structure of riboflavin kinase from Thermoplasma acidophilum==
The line below this paragraph, containing "STRUCTURE_3cta", creates the "Structure Box" on the page.
<StructureSection load='3cta' size='340' side='right'caption='[[3cta]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3cta]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermoplasma_acidophilum_DSM_1728 Thermoplasma acidophilum DSM 1728]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CTA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CTA FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cta FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cta OCA], [https://pdbe.org/3cta PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cta RCSB], [https://www.ebi.ac.uk/pdbsum/3cta PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cta ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3cta TOPSAN]</span></td></tr>
{{STRUCTURE_3cta|  PDB=3cta  |  SCENE=  }}
</table>
 
== Function ==
===Crystal structure of riboflavin kinase from Thermoplasma acidophilum===
[https://www.uniprot.org/uniprot/RIFK_THEAC RIFK_THEAC] Catalyzes the CTP-dependent phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN).
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
3CTA is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Thermoplasma_acidophilum_dsm_1728 Thermoplasma acidophilum dsm 1728]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CTA OCA].  
  <jmolCheckbox>
[[Category: Thermoplasma acidophilum dsm 1728]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ct/3cta_consurf.spt"</scriptWhenChecked>
[[Category: Almo, S C.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Bain, K T.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Bonanno, J B.]]
  </jmolCheckbox>
[[Category: Burley, S K.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cta ConSurf].
[[Category: Mendoza, M.]]
<div style="clear:both"></div>
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
__TOC__
[[Category: Romero, R.]]
</StructureSection>
[[Category: Rutter, M.]]
[[Category: Large Structures]]
[[Category: Sauder, J M.]]
[[Category: Thermoplasma acidophilum DSM 1728]]
[[Category: Smith, D.]]
[[Category: Almo SC]]
[[Category: Wasserman, S.]]
[[Category: Bain KT]]
[[Category: Fmn]]
[[Category: Bonanno JB]]
[[Category: Kinase]]
[[Category: Burley SK]]
[[Category: Magnesium]]
[[Category: Mendoza M]]
[[Category: Metal-binding]]
[[Category: Romero R]]
[[Category: New york sgx research center for structural genomic]]
[[Category: Rutter M]]
[[Category: Nucleotide-binding]]
[[Category: Sauder JM]]
[[Category: Nysgxrc]]
[[Category: Smith D]]
[[Category: Protein structure initiative]]
[[Category: Wasserman S]]
[[Category: Psi-2]]
[[Category: Structural genomic]]
[[Category: Transferase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 09:49:35 2008''

Latest revision as of 12:38, 21 February 2024

Crystal structure of riboflavin kinase from Thermoplasma acidophilumCrystal structure of riboflavin kinase from Thermoplasma acidophilum

Structural highlights

3cta is a 1 chain structure with sequence from Thermoplasma acidophilum DSM 1728. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.2Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

RIFK_THEAC Catalyzes the CTP-dependent phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN).

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3cta, resolution 2.20Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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