3clv: Difference between revisions

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[[Image:3clv.png|left|200px]]


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==Crystal Structure of Rab5a from plasmodium falciparum, PFB0500c==
The line below this paragraph, containing "STRUCTURE_3clv", creates the "Structure Box" on the page.
<StructureSection load='3clv' size='340' side='right'caption='[[3clv]], [[Resolution|resolution]] 1.89&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3clv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_falciparum Plasmodium falciparum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CLV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CLV FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.89&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene></td></tr>
{{STRUCTURE_3clv|  PDB=3clv  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3clv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3clv OCA], [https://pdbe.org/3clv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3clv RCSB], [https://www.ebi.ac.uk/pdbsum/3clv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3clv ProSAT]</span></td></tr>
 
</table>
===Crystal Structure of Rab5a from plasmodium falciparum, PFB0500c===
== Function ==
 
[https://www.uniprot.org/uniprot/O96193_PLAF7 O96193_PLAF7]
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3CLV is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Plasmodium_falciparum Plasmodium falciparum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CLV OCA].  
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cl/3clv_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3clv ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Plasmodium falciparum]]
[[Category: Plasmodium falciparum]]
[[Category: Arrowsmith, C H.]]
[[Category: Arrowsmith CH]]
[[Category: Bochkarev, A.]]
[[Category: Bochkarev A]]
[[Category: Bountra, C.]]
[[Category: Bountra C]]
[[Category: Chattopadhyay, D.]]
[[Category: Chattopadhyay D]]
[[Category: Cossar, D.]]
[[Category: Cossar D]]
[[Category: Edwards, A M.]]
[[Category: Edwards AM]]
[[Category: Hui, R.]]
[[Category: Hui R]]
[[Category: Kozieradzki, I.]]
[[Category: Kozieradzki I]]
[[Category: Langsley, G.]]
[[Category: Langsley G]]
[[Category: Lew, J.]]
[[Category: Lew J]]
[[Category: SGC, Structural Genomics Consortium.]]
[[Category: Schapira M]]
[[Category: Schapira, M.]]
[[Category: Sukumar D]]
[[Category: Sukumar, D.]]
[[Category: Weigelt J]]
[[Category: Weigelt, J.]]
[[Category: Wernimont AK]]
[[Category: Wernimont, A K.]]
[[Category: Gtp-binding]]
[[Category: Gtpase]]
[[Category: Malaria]]
[[Category: Nucleotide-binding]]
[[Category: Rab]]
[[Category: Sgc]]
[[Category: Signaling protein]]
[[Category: Structural genomic]]
[[Category: Structural genomics consortium]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 09:14:24 2009''

Latest revision as of 12:36, 21 February 2024

Crystal Structure of Rab5a from plasmodium falciparum, PFB0500cCrystal Structure of Rab5a from plasmodium falciparum, PFB0500c

Structural highlights

3clv is a 1 chain structure with sequence from Plasmodium falciparum. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.89Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

O96193_PLAF7

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3clv, resolution 1.89Å

Drag the structure with the mouse to rotate

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OCA
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