3ca9: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(11 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:3ca9.jpg|left|200px]]


<!--
==Evolution of chlorella virus dUTPase==
The line below this paragraph, containing "STRUCTURE_3ca9", creates the "Structure Box" on the page.
<StructureSection load='3ca9' size='340' side='right'caption='[[3ca9]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3ca9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Paramecium_bursaria_Chlorella_virus_IL3A Paramecium bursaria Chlorella virus IL3A]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CA9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CA9 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DUD:DEOXYURIDINE-5-DIPHOSPHATE'>DUD</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
{{STRUCTURE_3ca9|  PDB=3ca9 |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ca9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ca9 OCA], [https://pdbe.org/3ca9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ca9 RCSB], [https://www.ebi.ac.uk/pdbsum/3ca9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ca9 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q5I3E5_PBCVI Q5I3E5_PBCVI]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ca/3ca9_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ca9 ConSurf].
<div style="clear:both"></div>


===Evolution of chlorella virus dUTPase===
==See Also==
 
*[[DUTPase 3D structures|DUTPase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
3CA9 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Paramecium_bursaria_chlorella_virus_il3a Paramecium bursaria chlorella virus il3a]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CA9 OCA].
[[Category: Large Structures]]
[[Category: Paramecium bursaria chlorella virus il3a]]
[[Category: Paramecium bursaria Chlorella virus IL3A]]
[[Category: DUTP diphosphatase]]
[[Category: Etten LVJ]]
[[Category: Etten, L V.J.]]
[[Category: Homma K]]
[[Category: Homma, K.]]
[[Category: Moriyama H]]
[[Category: Moriyama, H.]]
[[Category: Yamanishi M]]
[[Category: Yamanishi, M.]]
[[Category: Zhang Y]]
[[Category: Zhang, Y.]]
[[Category: Dutpase chlorella virus]]
[[Category: Hydrolase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar  4 14:40:15 2009''

Latest revision as of 12:34, 21 February 2024

Evolution of chlorella virus dUTPaseEvolution of chlorella virus dUTPase

Structural highlights

3ca9 is a 2 chain structure with sequence from Paramecium bursaria Chlorella virus IL3A. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 3Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q5I3E5_PBCVI

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3ca9, resolution 3.00Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=3ca9&oldid=4063782"