3ca9: Difference between revisions

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-{{Seed}}
-[[Image:3ca9.png|left|200px]]
-<!--
+==Evolution of chlorella virus dUTPase==
-The line below this paragraph, containing "STRUCTURE_3ca9", creates the "Structure Box" on the page.
+<StructureSection load='3ca9' size='340' side='right'caption='[[3ca9]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[3ca9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Paramecium_bursaria_Chlorella_virus_IL3A Paramecium bursaria Chlorella virus IL3A]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CA9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CA9 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DUD:DEOXYURIDINE-5-DIPHOSPHATE'>DUD</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-{{STRUCTURE_3ca9|  PDB=3ca9  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ca9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ca9 OCA], [https://pdbe.org/3ca9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ca9 RCSB], [https://www.ebi.ac.uk/pdbsum/3ca9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ca9 ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q5I3E5_PBCVI Q5I3E5_PBCVI]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ca/3ca9_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ca9 ConSurf].
+<div style="clear:both"></div>
-===Evolution of chlorella virus dUTPase===
+==See Also==
+*[[DUTPase 3D structures|DUTPase 3D structures]]
+__TOC__
-==About this Structure==
+</StructureSection>
-CA9 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Paramecium_bursaria_chlorella_virus_il3a Paramecium bursaria chlorella virus il3a]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CA9 OCA].
+[[Category: Large Structures]]
-[[Category: Paramecium bursaria chlorella virus il3a]]
+[[Category: Paramecium bursaria Chlorella virus IL3A]]
-[[Category: DUTP diphosphatase]]
+[[Category: Etten LVJ]]
-[[Category: Etten, L V.J.]]
+[[Category: Homma K]]
-[[Category: Homma, K.]]
+[[Category: Moriyama H]]
-[[Category: Moriyama, H.]]
+[[Category: Yamanishi M]]
-[[Category: Yamanishi, M.]]
+[[Category: Zhang Y]]
-[[Category: Zhang, Y.]]
-[[Category: Dutpase chlorella virus]]
-[[Category: Hydrolase]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Nov 18 20:04:17 2009''