3c19: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(11 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:3c19.jpg|left|200px]]


{{Structure
==Crystal structure of protein MK0293 from Methanopyrus kandleri AV19==
|PDB= 3c19 |SIZE=350|CAPTION= <scene name='initialview01'>3c19</scene>, resolution 2.50&Aring;
<StructureSection load='3c19' size='340' side='right'caption='[[3c19]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
|SITE= <scene name='pdbsite=AC1:Po4+Binding+Site+For+Residue+A+185'>AC1</scene> and <scene name='pdbsite=AC2:Gol+Binding+Site+For+Residue+A+186'>AC2</scene>
== Structural highlights ==
|LIGAND= <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>
<table><tr><td colspan='2'>[[3c19]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanopyrus_kandleri_AV19 Methanopyrus kandleri AV19]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C19 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C19 FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
|GENE= MK0293 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=190192 Methanopyrus kandleri AV19])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
|DOMAIN=
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c19 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c19 OCA], [https://pdbe.org/3c19 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c19 RCSB], [https://www.ebi.ac.uk/pdbsum/3c19 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c19 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3c19 TOPSAN]</span></td></tr>
|RELATEDENTRY=
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3c19 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c19 OCA], [http://www.ebi.ac.uk/pdbsum/3c19 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=3c19 RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/Q8TYK3_METKA Q8TYK3_METKA]
 
== Evolutionary Conservation ==
'''Crystal structure of protein MK0293 from Methanopyrus kandleri AV19'''
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c1/3c19_consurf.spt"</scriptWhenChecked>
3C19 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Methanopyrus_kandleri_av19 Methanopyrus kandleri av19]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C19 OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Methanopyrus kandleri av19]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Single protein]]
  </jmolCheckbox>
[[Category: Almo, S C.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3c19 ConSurf].
[[Category: Bain, K.]]
<div style="clear:both"></div>
[[Category: Bonanno, J B.]]
__TOC__
[[Category: Burley, S K.]]
</StructureSection>
[[Category: Chang, S.]]
[[Category: Large Structures]]
[[Category: Dickey, M.]]
[[Category: Methanopyrus kandleri AV19]]
[[Category: Koss, J.]]
[[Category: Almo SC]]
[[Category: Malashkevich, V.]]
[[Category: Bain K]]
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
[[Category: Bonanno JB]]
[[Category: Patskovsky, Y.]]
[[Category: Burley SK]]
[[Category: Romero, R.]]
[[Category: Chang S]]
[[Category: Sauder, J M.]]
[[Category: Dickey M]]
[[Category: Wasserman, S R.]]
[[Category: Koss J]]
[[Category: new york structural genomix research consortium]]
[[Category: Malashkevich V]]
[[Category: nysgxrc]]
[[Category: Patskovsky Y]]
[[Category: protein mk0293]]
[[Category: Romero R]]
[[Category: protein structure initiative]]
[[Category: Sauder JM]]
[[Category: psi-2]]
[[Category: Wasserman SR]]
[[Category: structural genomic]]
[[Category: uncharacterized protein]]
[[Category: unknown function]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:30:04 2008''

Latest revision as of 12:32, 21 February 2024

Crystal structure of protein MK0293 from Methanopyrus kandleri AV19Crystal structure of protein MK0293 from Methanopyrus kandleri AV19

Structural highlights

3c19 is a 1 chain structure with sequence from Methanopyrus kandleri AV19. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.5Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q8TYK3_METKA

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3c19, resolution 2.50Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=3c19&oldid=4063683"