3c19: Difference between revisions

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-[[Image:3c19.jpg|left|200px]]<br /><applet load="3c19" size="350" color="white" frame="true" align="right" spinBox="true"
-caption="3c19, resolution 2.50&Aring;" />
-'''Crystal structure of protein MK0293 from Methanopyrus kandleri AV19'''<br />
-==About this Structure==
+==Crystal structure of protein MK0293 from Methanopyrus kandleri AV19==
-C19 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Methanopyrus_kandleri_av19 Methanopyrus kandleri av19] with <scene name='pdbligand=PO4:'>PO4</scene> and <scene name='pdbligand=GOL:'>GOL</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Known structural/functional Sites: <scene name='pdbsite=AC1:Po4+Binding+Site+For+Residue+A+185'>AC1</scene> and <scene name='pdbsite=AC2:Gol+Binding+Site+For+Residue+A+186'>AC2</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C19 OCA].
+<StructureSection load='3c19' size='340' side='right'caption='[[3c19]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
-[[Category: Methanopyrus kandleri av19]]
+== Structural highlights ==
-[[Category: Single protein]]
+<table><tr><td colspan='2'>[[3c19]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanopyrus_kandleri_AV19 Methanopyrus kandleri AV19]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C19 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C19 FirstGlance]. <br>
-[[Category: Almo, S.C.]]
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-[[Category: Bain, K.]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-[[Category: Bonanno, J.B.]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c19 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c19 OCA], [https://pdbe.org/3c19 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c19 RCSB], [https://www.ebi.ac.uk/pdbsum/3c19 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c19 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3c19 TOPSAN]</span></td></tr>
-[[Category: Burley, S.K.]]
+</table>
-[[Category: Chang, S.]]
+== Function ==
-[[Category: Dickey, M.]]
+[https://www.uniprot.org/uniprot/Q8TYK3_METKA Q8TYK3_METKA]
-[[Category: Koss, J.]]
+== Evolutionary Conservation ==
-[[Category: Malashkevich, V.]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: NYSGXRC, New.York.Structural.GenomiX.Research.Consortium.]]
+Check<jmol>
-[[Category: Patskovsky, Y.]]
+  <jmolCheckbox>
-[[Category: Romero, R.]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c1/3c19_consurf.spt"</scriptWhenChecked>
-[[Category: Sauder, J.M.]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: Wasserman, S.R.]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: GOL]]
+  </jmolCheckbox>
-[[Category: PO4]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3c19 ConSurf].
-[[Category: new york structural genomix research consortium]]
+<div style="clear:both"></div>
-[[Category: nysgxrc]]
+__TOC__
-[[Category: predicted phosphohydrolase]]
+</StructureSection>
-[[Category: protein structure initiative]]
+[[Category: Large Structures]]
-[[Category: psi-2]]
+[[Category: Methanopyrus kandleri AV19]]
-[[Category: structural genomics]]
+[[Category: Almo SC]]
-[[Category: uncharacterized protein]]
+[[Category: Bain K]]
-[[Category: unknown function]]
+[[Category: Bonanno JB]]
+[[Category: Burley SK]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb  6 17:27:03 2008''
+[[Category: Chang S]]
+[[Category: Dickey M]]
+[[Category: Koss J]]
+[[Category: Malashkevich V]]
+[[Category: Patskovsky Y]]
+[[Category: Romero R]]
+[[Category: Sauder JM]]
+[[Category: Wasserman SR]]