3byr: Difference between revisions

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[[Image:3byr.jpg|left|200px]]


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==Mode of Action of a Putative Zinc Transporter CzrB (Zn form)==
The line below this paragraph, containing "STRUCTURE_3byr", creates the "Structure Box" on the page.
<StructureSection load='3byr' size='340' side='right'caption='[[3byr]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3byr]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BYR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BYR FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_3byr|  PDB=3byr  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3byr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3byr OCA], [https://pdbe.org/3byr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3byr RCSB], [https://www.ebi.ac.uk/pdbsum/3byr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3byr ProSAT]</span></td></tr>
 
</table>
===Mode of Action of a Putative Zinc Transporter CzrB (Zn form)===
== Function ==
 
[https://www.uniprot.org/uniprot/Q8VLX7_THETH Q8VLX7_THETH]
 
== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_18786400}}, adds the Publication Abstract to the page
Check<jmol>
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/by/3byr_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_18786400}}
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    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
3BYR is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BYR OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3byr ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
Insights into the mode of action of a putative zinc transporter CzrB in Thermus thermophilus., Cherezov V, Hofer N, Szebenyi DM, Kolaj O, Wall JG, Gillilan R, Srinivasan V, Jaroniec CP, Caffrey M, Structure. 2008 Sep 10;16(9):1378-88. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18786400 18786400]
</StructureSection>
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Thermus thermophilus]]
[[Category: Thermus thermophilus]]
[[Category: Caffrey, M.]]
[[Category: Caffrey M]]
[[Category: Cherezov, V.]]
[[Category: Cherezov V]]
[[Category: Srinivasan, V.]]
[[Category: Srinivasan V]]
[[Category: Szebenyi, D M.E.]]
[[Category: Szebenyi DME]]
[[Category: Membrane protein]]
[[Category: Transport protein]]
[[Category: Zinc transporter]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 24 10:38:13 2008''

Latest revision as of 12:31, 21 February 2024

Mode of Action of a Putative Zinc Transporter CzrB (Zn form)Mode of Action of a Putative Zinc Transporter CzrB (Zn form)

Structural highlights

3byr is a 1 chain structure with sequence from Thermus thermophilus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.8Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q8VLX7_THETH

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3byr, resolution 1.80Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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