3bma: Difference between revisions

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New page: left|200px<br /><applet load="3bma" size="350" color="white" frame="true" align="right" spinBox="true" caption="3bma, resolution 2.24Å" /> '''Crystal structure of...
 
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[[Image:3bma.jpg|left|200px]]<br /><applet load="3bma" size="350" color="white" frame="true" align="right" spinBox="true"
caption="3bma, resolution 2.24&Aring;" />
'''Crystal structure of D-alanyl-lipoteichoic acid synthetase from Streptococcus pneumoniae R6'''<br />


==About this Structure==
==Crystal structure of D-alanyl-lipoteichoic acid synthetase from Streptococcus pneumoniae R6==
3BMA is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_pneumoniae_r6 Streptococcus pneumoniae r6] with <scene name='pdbligand=SO4:'>SO4</scene> and <scene name='pdbligand=GOL:'>GOL</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BMA OCA].
<StructureSection load='3bma' size='340' side='right'caption='[[3bma]], [[Resolution|resolution]] 2.24&Aring;' scene=''>
[[Category: Single protein]]
== Structural highlights ==
[[Category: Streptococcus pneumoniae r6]]
<table><tr><td colspan='2'>[[3bma]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae_R6 Streptococcus pneumoniae R6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BMA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BMA FirstGlance]. <br>
[[Category: Almo, S.C.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.24&#8491;</td></tr>
[[Category: Bain, K.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
[[Category: Bonanno, J.B.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bma FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bma OCA], [https://pdbe.org/3bma PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bma RCSB], [https://www.ebi.ac.uk/pdbsum/3bma PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bma ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3bma TOPSAN]</span></td></tr>
[[Category: Burley, S.K.]]
</table>
[[Category: Gheyi, T.]]
== Function ==
[[Category: Iizuka, M.]]
[https://www.uniprot.org/uniprot/Q8DN13_STRR6 Q8DN13_STRR6]  
[[Category: Koss, J.]]
== Evolutionary Conservation ==
[[Category: NYSGXRC, New.York.Structural.GenomiX.Research.Consortium.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Patskovsky, Y.]]
Check<jmol>
[[Category: Rutter, M.]]
  <jmolCheckbox>
[[Category: Sauder, J.M.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bm/3bma_consurf.spt"</scriptWhenChecked>
[[Category: Smith, D.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Sridhar, V.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Wasserman, S.R.]]
  </jmolCheckbox>
[[Category: GOL]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bma ConSurf].
[[Category: SO4]]
<div style="clear:both"></div>
[[Category: d-alanyl-lipoteichoic acid biosynthesis]]
__TOC__
[[Category: ligase]]
</StructureSection>
[[Category: new york structural genomix research consortium]]
[[Category: Large Structures]]
[[Category: nysgxrc]]
[[Category: Streptococcus pneumoniae R6]]
[[Category: protein structure initiative]]
[[Category: Almo SC]]
[[Category: psi-2]]
[[Category: Bain K]]
[[Category: structural genomics]]
[[Category: Bonanno JB]]
 
[[Category: Burley SK]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 11:30:25 2008''
[[Category: Gheyi T]]
[[Category: Iizuka M]]
[[Category: Koss J]]
[[Category: Patskovsky Y]]
[[Category: Rutter M]]
[[Category: Sauder JM]]
[[Category: Smith D]]
[[Category: Sridhar V]]
[[Category: Wasserman SR]]

Latest revision as of 12:29, 21 February 2024

Crystal structure of D-alanyl-lipoteichoic acid synthetase from Streptococcus pneumoniae R6Crystal structure of D-alanyl-lipoteichoic acid synthetase from Streptococcus pneumoniae R6

Structural highlights

3bma is a 6 chain structure with sequence from Streptococcus pneumoniae R6. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.24Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q8DN13_STRR6

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3bma, resolution 2.24Å

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OCA
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