3b40: Difference between revisions

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 ==Crystal structure of the probable dipeptidase PvdM from Pseudomonas aeruginosa==
-<StructureSection load='3b40' size='340' side='right' caption='[[3b40]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
+<StructureSection load='3b40' size='340' side='right'caption='[[3b40]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[3b40]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_aeruginosus"_(schroeter_1872)_trevisan_1885 "bacillus aeruginosus" (schroeter 1872) trevisan 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3B40 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3B40 FirstGlance]. <br>
+<table><tr><td colspan='2'>[[3b40]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3B40 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3B40 FirstGlance]. <br>
-</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">pvdM, PA2393 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=287 "Bacillus aeruginosus" (Schroeter 1872) Trevisan 1885])</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3b40 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3b40 OCA], [http://pdbe.org/3b40 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3b40 RCSB], [http://www.ebi.ac.uk/pdbsum/3b40 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3b40 ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/3b40 TOPSAN]</span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3b40 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3b40 OCA], [https://pdbe.org/3b40 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3b40 RCSB], [https://www.ebi.ac.uk/pdbsum/3b40 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3b40 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3b40 TOPSAN]</span></td></tr>
 </table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q5DIQ1_PSEAI Q5DIQ1_PSEAI]
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
@@ Line 20: / Line 22: @@
 __TOC__
 </StructureSection>
-[[Category: Almo, S C]]
+[[Category: Large Structures]]
-[[Category: Bain, K T]]
+[[Category: Pseudomonas aeruginosa]]
-[[Category: Bonanno, J B]]
+[[Category: Almo SC]]
-[[Category: Burley, S K]]
+[[Category: Bain KT]]
-[[Category: Dickey, M]]
+[[Category: Bonanno JB]]
-[[Category: Fong, R]]
+[[Category: Burley SK]]
-[[Category: Mendoza, M]]
+[[Category: Dickey M]]
-[[Category: Structural genomic]]
+[[Category: Fong R]]
-[[Category: Patskovsky, Y]]
+[[Category: Mendoza M]]
-[[Category: Sauder, J M]]
+[[Category: Patskovsky Y]]
-[[Category: Smith, D]]
+[[Category: Sauder JM]]
-[[Category: Wasserman, S]]
+[[Category: Smith D]]
-[[Category: Hydrolase]]
+[[Category: Wasserman S]]
-[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
-[[Category: PSI, Protein structure initiative]]