2rek: Difference between revisions

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==Crystal structure of tetR-family transcriptional regulator==
==Crystal structure of tetR-family transcriptional regulator==
<StructureSection load='2rek' size='340' side='right' caption='[[2rek]], [[Resolution|resolution]] 1.86&Aring;' scene=''>
<StructureSection load='2rek' size='340' side='right'caption='[[2rek]], [[Resolution|resolution]] 1.86&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2rek]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptomyces_coelicolor_a3(2) Streptomyces coelicolor a3(2)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2REK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2REK FirstGlance]. <br>
<table><tr><td colspan='2'>[[2rek]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_coelicolor_A3(2) Streptomyces coelicolor A3(2)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2REK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2REK FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.86&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SCO5068 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=100226 Streptomyces coelicolor A3(2)])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2rek FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rek OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2rek RCSB], [http://www.ebi.ac.uk/pdbsum/2rek PDBsum], [http://www.topsan.org/Proteins/MCSG/2rek TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2rek FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rek OCA], [https://pdbe.org/2rek PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2rek RCSB], [https://www.ebi.ac.uk/pdbsum/2rek PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2rek ProSAT], [https://www.topsan.org/Proteins/MCSG/2rek TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q9ADD9_STRCO Q9ADD9_STRCO]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/re/2rek_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/re/2rek_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2rek ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
==See Also==
*[[Tetracycline repressor protein 3D structures|Tetracycline repressor protein 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Dong, A]]
[[Category: Large Structures]]
[[Category: Edwards, A M]]
[[Category: Dong A]]
[[Category: Gu, J]]
[[Category: Edwards AM]]
[[Category: Joachimiak, A]]
[[Category: Gu J]]
[[Category: Structural genomic]]
[[Category: Joachimiak A]]
[[Category: Savchenko, A]]
[[Category: Savchenko A]]
[[Category: Xu, X]]
[[Category: Xu X]]
[[Category: Cr]]
[[Category: Dna-binding]]
[[Category: Mcsg]]
[[Category: PSI, Protein structure initiative]]
[[Category: Sad]]
[[Category: Sulfur]]
[[Category: Tetr-family]]
[[Category: Transcription]]
[[Category: Transcription regulation]]
[[Category: Transcriptional regulator]]

Latest revision as of 12:21, 21 February 2024

Crystal structure of tetR-family transcriptional regulatorCrystal structure of tetR-family transcriptional regulator

Structural highlights

2rek is a 2 chain structure with sequence from Streptomyces coelicolor A3(2). Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.86Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q9ADD9_STRCO

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2rek, resolution 1.86Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA