2qp9: Difference between revisions

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-[[Image:2qp9.png|left|200px]]
-{{STRUCTURE_2qp9|  PDB=2qp9  |  SCENE=  }}
+==Crystal Structure of S.cerevisiae Vps4==
+<StructureSection load='2qp9' size='340' side='right'caption='[[2qp9]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[2qp9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QP9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QP9 FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qp9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qp9 OCA], [https://pdbe.org/2qp9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qp9 RCSB], [https://www.ebi.ac.uk/pdbsum/2qp9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qp9 ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/VPS4_YEAST VPS4_YEAST] Involved in the transport of biosynthetic membrane proteins from the prevacuolar/endosomal compartment to the vacuole. Required for multivesicular body (MVB) protein sorting. Catalyzes the ATP-dependent dissociation of class E VPS proteins from endosomal membranes, such as the disassembly of the ESCRT-III complex.<ref>PMID:11329380</ref> <ref>PMID:9155008</ref> <ref>PMID:9606181</ref>
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qp/2qp9_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qp9 ConSurf].
+<div style="clear:both"></div>
-===Crystal Structure of S.cerevisiae Vps4===
+==See Also==
+*[[Vacuolar protein sorting-associated protein 3D structures|Vacuolar protein sorting-associated protein 3D structures]]
-{{ABSTRACT_PUBMED_17949747}}
+== References ==
+<references/>
-==About this Structure==
+__TOC__
-[[2qp9]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QP9 OCA].
+</StructureSection>
+[[Category: Large Structures]]
-==Reference==
-<ref group="xtra">PMID:017949747</ref><references group="xtra"/>
 [[Category: Saccharomyces cerevisiae]]
-[[Category: Xiao, J.]]
+[[Category: Xiao J]]
-[[Category: Xu, Z.]]
+[[Category: Xu Z]]
-[[Category: Atp-binding]]
-[[Category: Atpase domain]]
-[[Category: Beta domain]]
-[[Category: C-terminal helix]]
-[[Category: Endosome]]
-[[Category: Nucleotide-binding]]
-[[Category: Protein transport]]
-[[Category: Transport]]
-[[Category: Vacuole]]