2qlc: Difference between revisions

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-[[Image:2qlc.jpg|left|200px]]
- {{Structure
+==The crystal structure of DNA repair protein RadC from Chlorobium tepidum TLS==
-|PDB= 2qlc |SIZE=350|CAPTION= <scene name='initialview01'>2qlc</scene>, resolution 2.30&Aring;
+<StructureSection load='2qlc' size='340' side='right'caption='[[2qlc]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-|SITE=
+== Structural highlights ==
-|LIGAND=
+<table><tr><td colspan='2'>[[2qlc]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Chlorobaculum_tepidum_TLS Chlorobaculum tepidum TLS]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QLC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QLC FirstGlance]. <br>
-|ACTIVITY=
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-|GENE= radC, CT0611 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=194439 Chlorobium tepidum TLS])
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qlc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qlc OCA], [https://pdbe.org/2qlc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qlc RCSB], [https://www.ebi.ac.uk/pdbsum/2qlc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qlc ProSAT], [https://www.topsan.org/Proteins/MCSG/2qlc TOPSAN]</span></td></tr>
-|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam04002 RadC]</span>
+</table>
-|RELATEDENTRY=
+== Function ==
-|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qlc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qlc OCA], [http://www.ebi.ac.uk/pdbsum/2qlc PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2qlc RCSB]</span>
+[https://www.uniprot.org/uniprot/Y611_CHLTE Y611_CHLTE]
-}}
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
-'''The crystal structure of DNA repair protein RadC from Chlorobium tepidum TLS'''
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ql/2qlc_consurf.spt"</scriptWhenChecked>
-==About this Structure==
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-QLC is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Chlorobium_tepidum_tls Chlorobium tepidum tls]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QLC OCA].
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Chlorobium tepidum tls]]
+  </jmolCheckbox>
-[[Category: Single protein]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qlc ConSurf].
-[[Category: Clancy, S.]]
+<div style="clear:both"></div>
-[[Category: Duggan, E.]]
+__TOC__
-[[Category: Joachimiak, A.]]
+</StructureSection>
-[[Category: MCSG, Midwest Center for Structural Genomics.]]
+[[Category: Chlorobaculum tepidum TLS]]
-[[Category: Zhang, R.]]
+[[Category: Large Structures]]
-[[Category: dna binding protein]]
+[[Category: Clancy S]]
-[[Category: dna repair protein]]
+[[Category: Duggan E]]
-[[Category: mcsg]]
+[[Category: Joachimiak A]]
-[[Category: midwest center for structural genomic]]
+[[Category: Zhang R]]
-[[Category: protein structure initiative]]
-[[Category: psi-2]]
-[[Category: radc]]
-[[Category: structural genomic]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:50:34 2008''