2qen: Difference between revisions

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OCA

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-{{Seed}}
-[[Image:2qen.png|left|200px]]
-<!--
+==The walker-type atpase paby2304 of pyrococcus abyssi==
-The line below this paragraph, containing "STRUCTURE_2qen", creates the "Structure Box" on the page.
+<StructureSection load='2qen' size='340' side='right'caption='[[2qen]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2qen]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_abyssi Pyrococcus abyssi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QEN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QEN FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-{{STRUCTURE_2qen|  PDB=2qen  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qen FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qen OCA], [https://pdbe.org/2qen PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qen RCSB], [https://www.ebi.ac.uk/pdbsum/2qen PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qen ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q9V2L3_PYRAB Q9V2L3_PYRAB]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qe/2qen_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qen ConSurf].
+<div style="clear:both"></div>
-===The walker-type atpase paby2304 of pyrococcus abyssi===
+==See Also==
+*[[ATPase 3D structures|ATPase 3D structures]]
+__TOC__
-==About this Structure==
+</StructureSection>
-QEN is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_abyssi Pyrococcus abyssi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QEN OCA].
+[[Category: Large Structures]]
-==Reference==
-<ref group="xtra">PMID:16511197</ref><references group="xtra"/>
 [[Category: Pyrococcus abyssi]]
-[[Category: Bey, G.]]
+[[Category: Bey G]]
-[[Category: Cavarelli, J.]]
+[[Category: Cavarelli J]]
-[[Category: Lecompte, O.]]
+[[Category: Lecompte O]]
-[[Category: Moras, D.]]
+[[Category: Moras D]]
-[[Category: Poch, O.]]
+[[Category: Poch O]]
-[[Category: Uhring, M.]]
+[[Category: Uhring M]]
-[[Category: Atpase]]
-[[Category: Pyrococcus abyssi]]
-[[Category: Unknown function]]
-[[Category: Walker-type]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 09:14:36 2009''