2qc5: Difference between revisions

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-{{Seed}}
-[[Image:2qc5.png|left|200px]]
-<!--
+==Streptogramin B lyase structure==
-The line below this paragraph, containing "STRUCTURE_2qc5", creates the "Structure Box" on the page.
+<StructureSection load='2qc5' size='340' side='right'caption='[[2qc5]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2qc5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_cohnii Staphylococcus cohnii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QC5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QC5 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene></td></tr>
-{{STRUCTURE_2qc5|  PDB=2qc5  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qc5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qc5 OCA], [https://pdbe.org/2qc5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qc5 RCSB], [https://www.ebi.ac.uk/pdbsum/2qc5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qc5 ProSAT]</span></td></tr>
+</table>
-===Streptogramin B lyase structure===
+== Function ==
+[https://www.uniprot.org/uniprot/O87275_9STAP O87275_9STAP]
+== Evolutionary Conservation ==
-<!--
+[[Image:Consurf_key_small.gif|200px|right]]
-The line below this paragraph, {{ABSTRACT_PUBMED_18341294}}, adds the Publication Abstract to the page
+Check<jmol>
-(as it appears on PubMed at http://www.pubmed.gov), where 18341294 is the PubMed ID number.
+  <jmolCheckbox>
--->
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qc/2qc5_consurf.spt"</scriptWhenChecked>
-{{ABSTRACT_PUBMED_18341294}}
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
-==About this Structure==
+  </jmolCheckbox>
-QC5 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Staphylococcus_cohnii Staphylococcus cohnii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QC5 OCA].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qc5 ConSurf].
+<div style="clear:both"></div>
-==Reference==
+__TOC__
-<ref group="xtra">PMID:18341294</ref><references group="xtra"/>
+</StructureSection>
+[[Category: Large Structures]]
 [[Category: Staphylococcus cohnii]]
-[[Category: Bochtler, M.]]
+[[Category: Bochtler M]]
-[[Category: Lipka, M.]]
+[[Category: Lipka M]]
-[[Category: Beta propeller]]
-[[Category: Lyase]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 15:16:45 2009''