2pyo: Difference between revisions

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OCA

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-{{Seed}}
-[[Image:2pyo.png|left|200px]]
-<!--
+==Drosophila nucleosome core==
-The line below this paragraph, containing "STRUCTURE_2pyo", creates the "Structure Box" on the page.
+<StructureSection load='2pyo' size='340' side='right'caption='[[2pyo]], [[Resolution|resolution]] 2.43&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2pyo]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Drosophila_melanogaster Drosophila melanogaster] and [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PYO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PYO FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.43&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
-{{STRUCTURE_2pyo|  PDB=2pyo  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pyo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pyo OCA], [https://pdbe.org/2pyo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pyo RCSB], [https://www.ebi.ac.uk/pdbsum/2pyo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pyo ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/H3_DROME H3_DROME]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/py/2pyo_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pyo ConSurf].
+<div style="clear:both"></div>
-===Drosophila nucleosome core===
+==See Also==
+*[[Histone 3D structures|Histone 3D structures]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_17957772}}, adds the Publication Abstract to the page
-(as it appears on PubMed at http://www.pubmed.gov), where 17957772 is the PubMed ID number.
--->
-{{ABSTRACT_PUBMED_17957772}}
-==About this Structure==
-PYO is a 10 chains structure of sequences from [http://en.wikipedia.org/wiki/Drosophila_melanogaster Drosophila melanogaster] and [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PYO OCA].
-==Reference==
-<ref group="xtra">PMID:17957772</ref><references group="xtra"/>
 [[Category: Drosophila melanogaster]]
 [[Category: Homo sapiens]]
-[[Category: Clapier, C R.]]
+[[Category: Large Structures]]
-[[Category: Mueller, C W.]]
+[[Category: Clapier CR]]
-[[Category: Petosa, C.]]
+[[Category: Mueller CW]]
-[[Category: Histone fold]]
+[[Category: Petosa C]]
-[[Category: Nucleosome core]]
-[[Category: Structural protein/dna complex]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 11:20:03 2009''