2ppt: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
(14 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2ppt.jpg|left|200px]]<br /><applet load="2ppt" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2ppt, resolution 1.92&Aring;" />
'''Crystal structure of thioredoxin-2'''<br />


==About this Structure==
==Crystal structure of thioredoxin-2==
2PPT is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Rhodobacter_capsulatus Rhodobacter capsulatus] with <scene name='pdbligand=ZN:'>ZN</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Protein-disulfide_reductase Protein-disulfide reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.8.1.8 1.8.1.8] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PPT OCA].  
<StructureSection load='2ppt' size='340' side='right'caption='[[2ppt]], [[Resolution|resolution]] 1.92&Aring;' scene=''>
[[Category: Protein complex]]
== Structural highlights ==
[[Category: Protein-disulfide reductase]]
<table><tr><td colspan='2'>[[2ppt]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodobacter_capsulatus Rhodobacter capsulatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PPT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PPT FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.92&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ppt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ppt OCA], [https://pdbe.org/2ppt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ppt RCSB], [https://www.ebi.ac.uk/pdbsum/2ppt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ppt ProSAT]</span></td></tr>
</table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pp/2ppt_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ppt ConSurf].
<div style="clear:both"></div>
 
==See Also==
*[[Thioredoxin 3D structures|Thioredoxin 3D structures]]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Rhodobacter capsulatus]]
[[Category: Rhodobacter capsulatus]]
[[Category: Beckwith, J.]]
[[Category: Beckwith J]]
[[Category: Chou, S.]]
[[Category: Chou S]]
[[Category: Rapoport, T.]]
[[Category: Rapoport T]]
[[Category: Ye, J.]]
[[Category: Ye J]]
[[Category: ZN]]
[[Category: oxidoreductase]]
[[Category: thioredoxin-2]]
[[Category: thiredoxin]]
[[Category: zinc finger]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 18:31:53 2008''

Latest revision as of 12:11, 21 February 2024

Crystal structure of thioredoxin-2Crystal structure of thioredoxin-2

Structural highlights

2ppt is a 2 chain structure with sequence from Rhodobacter capsulatus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.92Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2ppt, resolution 1.92Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA