2phc: Difference between revisions

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==Crystal structure of conserved uncharacterized protein PH0987 from Pyrococcus horikoshii==
==Crystal structure of conserved uncharacterized protein PH0987 from Pyrococcus horikoshii==
<StructureSection load='2phc' size='340' side='right' caption='[[2phc]], [[Resolution|resolution]] 2.29&Aring;' scene=''>
<StructureSection load='2phc' size='340' side='right'caption='[[2phc]], [[Resolution|resolution]] 2.29&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2phc]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PHC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PHC FirstGlance]. <br>
<table><tr><td colspan='2'>[[2phc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PHC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PHC FirstGlance]. <br>
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PH0987 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=53953 Pyrococcus horikoshii])</td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.29&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2phc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2phc OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2phc RCSB], [http://www.ebi.ac.uk/pdbsum/2phc PDBsum], [http://www.topsan.org/Proteins/RSGI/2phc TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2phc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2phc OCA], [https://pdbe.org/2phc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2phc RCSB], [https://www.ebi.ac.uk/pdbsum/2phc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2phc ProSAT], [https://www.topsan.org/Proteins/RSGI/2phc TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/O58715_PYRHO O58715_PYRHO]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ph/2phc_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ph/2phc_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2phc ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Pyrococcus horikoshii]]
[[Category: Large Structures]]
[[Category: Chen, L]]
[[Category: Pyrococcus horikoshii OT3]]
[[Category: Chrzas, J]]
[[Category: Chen L]]
[[Category: Ebihara, A]]
[[Category: Chrzas J]]
[[Category: Fu, Z-Q]]
[[Category: Ebihara A]]
[[Category: II, J T.Swindell]]
[[Category: Fu Z-Q]]
[[Category: Kuramitsu, S]]
[[Category: Kuramitsu S]]
[[Category: Structural genomic]]
[[Category: Rose JP]]
[[Category: Rose, J P]]
[[Category: Shinkai A]]
[[Category: Shinkai, A]]
[[Category: Swindell II JT]]
[[Category: Wang, B-C]]
[[Category: Wang B-C]]
[[Category: Yokoyama, S]]
[[Category: Yokoyama S]]
[[Category: Zhu, J]]
[[Category: Zhu J]]
[[Category: Ph0730]]
[[Category: PSI, Protein structure initiative]]
[[Category: Rsgi]]
[[Category: Secsg]]
[[Category: Unknown function]]

Latest revision as of 12:09, 21 February 2024

Crystal structure of conserved uncharacterized protein PH0987 from Pyrococcus horikoshiiCrystal structure of conserved uncharacterized protein PH0987 from Pyrococcus horikoshii

Structural highlights

2phc is a 1 chain structure with sequence from Pyrococcus horikoshii OT3. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.29Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

O58715_PYRHO

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2phc, resolution 2.29Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA