2pg0: Difference between revisions

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New page: left|200px<br /><applet load="2pg0" size="350" color="white" frame="true" align="right" spinBox="true" caption="2pg0, resolution 1.800Å" /> '''Crystal structure o...
 
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[[Image:2pg0.jpg|left|200px]]<br /><applet load="2pg0" size="350" color="white" frame="true" align="right" spinBox="true"
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'''Crystal structure of acyl-CoA dehydrogenase from Geobacillus kaustophilus'''<br />


==About this Structure==
==Crystal structure of acyl-CoA dehydrogenase from Geobacillus kaustophilus==
2PG0 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Geobacillus_kaustophilus Geobacillus kaustophilus] with <scene name='pdbligand=FAD:'>FAD</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Acyl-CoA_dehydrogenase Acyl-CoA dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.3.99.3 1.3.99.3] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PG0 OCA].  
<StructureSection load='2pg0' size='340' side='right'caption='[[2pg0]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
[[Category: Acyl-CoA dehydrogenase]]
== Structural highlights ==
[[Category: Geobacillus kaustophilus]]
<table><tr><td colspan='2'>[[2pg0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_kaustophilus_HTA426 Geobacillus kaustophilus HTA426]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PG0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PG0 FirstGlance]. <br>
[[Category: Single protein]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
[[Category: Chen, L-Q.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>
[[Category: Chen, L.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pg0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pg0 OCA], [https://pdbe.org/2pg0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pg0 RCSB], [https://www.ebi.ac.uk/pdbsum/2pg0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pg0 ProSAT], [https://www.topsan.org/Proteins/RSGI/2pg0 TOPSAN]</span></td></tr>
[[Category: Ebihara, A.]]
</table>
[[Category: Fu, Z-Q.]]
== Function ==
[[Category: Kuramitsu, S.]]
[https://www.uniprot.org/uniprot/Q5L0D5_GEOKA Q5L0D5_GEOKA]  
[[Category: Li, Y.]]
== Evolutionary Conservation ==
[[Category: RSGI, RIKEN.Structural.Genomics/Proteomics.Initiative.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Rose, J.P.]]
Check<jmol>
[[Category: SECSG, Southeast.Collaboratory.for.Structural.Genomics.]]
  <jmolCheckbox>
[[Category: Shinkai, A.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pg/2pg0_consurf.spt"</scriptWhenChecked>
[[Category: Wang, B-C.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Yokoyama, S.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Zhao, M.]]
  </jmolCheckbox>
[[Category: FAD]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pg0 ConSurf].
[[Category: acyl-coa dehydrogenase]]
<div style="clear:both"></div>
[[Category: geobacillus kaustophilus hta426]]
[[Category: gk1316]]
[[Category: national project on protein structural and functional analyses]]
[[Category: nppsfa]]
[[Category: protein structure initiative]]
[[Category: psi]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: rsgi]]
[[Category: secsg]]
[[Category: southeast collaboratory for structural genomics]]
[[Category: structural genomics]]


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 15:21:57 2008''
==See Also==
*[[Acyl-CoA dehydrogenase 3D structures|Acyl-CoA dehydrogenase 3D structures]]
__TOC__
</StructureSection>
[[Category: Geobacillus kaustophilus HTA426]]
[[Category: Large Structures]]
[[Category: Chen L]]
[[Category: Chen L-Q]]
[[Category: Ebihara A]]
[[Category: Fu Z-Q]]
[[Category: Kuramitsu S]]
[[Category: Li Y]]
[[Category: Rose JP]]
[[Category: Shinkai A]]
[[Category: Wang B-C]]
[[Category: Yokoyama S]]
[[Category: Zhao M]]

Latest revision as of 12:09, 21 February 2024

Crystal structure of acyl-CoA dehydrogenase from Geobacillus kaustophilusCrystal structure of acyl-CoA dehydrogenase from Geobacillus kaustophilus

Structural highlights

2pg0 is a 2 chain structure with sequence from Geobacillus kaustophilus HTA426. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.8Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q5L0D5_GEOKA

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2pg0, resolution 1.80Å

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