2pcs: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-[[Image:2pcs.gif|left|200px]]
-<!--
+==Crystal structure of conserved protein from Geobacillus kaustophilus==
-The line below this paragraph, containing "STRUCTURE_2pcs", creates the "Structure Box" on the page.
+<StructureSection load='2pcs' size='340' side='right'caption='[[2pcs]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2pcs]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_kaustophilus_HTA426 Geobacillus kaustophilus HTA426]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PCS FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>
-{{STRUCTURE_2pcs|  PDB=2pcs  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pcs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pcs OCA], [https://pdbe.org/2pcs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pcs RCSB], [https://www.ebi.ac.uk/pdbsum/2pcs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pcs ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2pcs TOPSAN]</span></td></tr>
+</table>
-'''Crystal structure of conserved protein from Geobacillus kaustophilus'''
+== Function ==
+[https://www.uniprot.org/uniprot/Q5QL47_GEOKA Q5QL47_GEOKA]
+== Evolutionary Conservation ==
-==About this Structure==
+[[Image:Consurf_key_small.gif|200px|right]]
-PCS is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Geobacillus_kaustophilus Geobacillus kaustophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCS OCA].
+Check<jmol>
-[[Category: Geobacillus kaustophilus]]
+  <jmolCheckbox>
-[[Category: Single protein]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pc/2pcs_consurf.spt"</scriptWhenChecked>
-[[Category: Almo, S C.]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: Bain, K T.]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Bonanno, J B.]]
+  </jmolCheckbox>
-[[Category: Burley, S K.]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pcs ConSurf].
-[[Category: Gilmore, J.]]
+<div style="clear:both"></div>
-[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+__TOC__
-[[Category: Romero, R.]]
+</StructureSection>
-[[Category: Sauder, M J.]]
+[[Category: Geobacillus kaustophilus HTA426]]
-[[Category: Smith, D.]]
+[[Category: Large Structures]]
-[[Category: Wasserman, S.]]
+[[Category: Almo SC]]
-[[Category: Wu, B.]]
+[[Category: Bain KT]]
-[[Category: Ligand binding]]
+[[Category: Bonanno JB]]
-[[Category: New york structural genomix research consortium]]
+[[Category: Burley SK]]
-[[Category: Nysgxrc]]
+[[Category: Gilmore J]]
-[[Category: Protein structure initiative]]
+[[Category: Romero R]]
-[[Category: Psi-2]]
+[[Category: Sauder JM]]
-[[Category: Structural genomic]]
+[[Category: Smith D]]
-[[Category: Unknown function]]
+[[Category: Wasserman S]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 12:52:04 2008''
+[[Category: Wu B]]