2oz8: Difference between revisions

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[[Image:2oz8.gif|left|200px]]


{{Structure
==Crystal structure of putative mandelate racemase from Mesorhizobium loti==
|PDB= 2oz8 |SIZE=350|CAPTION= <scene name='initialview01'>2oz8</scene>, resolution 2.480&Aring;
<StructureSection load='2oz8' size='340' side='right'caption='[[2oz8]], [[Resolution|resolution]] 2.48&Aring;' scene=''>
|SITE=
== Structural highlights ==
|LIGAND= <scene name='pdbligand=SO4:SULFATE ION'>SO4</scene>
<table><tr><td colspan='2'>[[2oz8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mesorhizobium_japonicum_MAFF_303099 Mesorhizobium japonicum MAFF 303099]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OZ8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OZ8 FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.48&#8491;</td></tr>
|GENE= mll7089 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=381 Mesorhizobium loti])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
}}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2oz8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oz8 OCA], [https://pdbe.org/2oz8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2oz8 RCSB], [https://www.ebi.ac.uk/pdbsum/2oz8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2oz8 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2oz8 TOPSAN]</span></td></tr>
 
</table>
'''Crystal structure of putative mandelate racemase from Mesorhizobium loti'''
== Function ==
 
[https://www.uniprot.org/uniprot/Q987E0_RHILO Q987E0_RHILO]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
2OZ8 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Mesorhizobium_loti Mesorhizobium loti]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OZ8 OCA].  
Check<jmol>
[[Category: Mesorhizobium loti]]
  <jmolCheckbox>
[[Category: Single protein]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oz/2oz8_consurf.spt"</scriptWhenChecked>
[[Category: Almo, S C.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Bain, K T.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Bonanno, J B.]]
  </jmolCheckbox>
[[Category: Burley, S K.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2oz8 ConSurf].
[[Category: Freeman, J.]]
<div style="clear:both"></div>
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
__TOC__
[[Category: Sauder, M J.]]
</StructureSection>
[[Category: Smith, D.]]
[[Category: Large Structures]]
[[Category: Sridhar, V.]]
[[Category: Mesorhizobium japonicum MAFF 303099]]
[[Category: Wasserman, S.]]
[[Category: Almo SC]]
[[Category: Wu, B.]]
[[Category: Bain KT]]
[[Category: SO4]]
[[Category: Bonanno JB]]
[[Category: new york structural genomix research consortium]]
[[Category: Burley SK]]
[[Category: nysgxrc]]
[[Category: Freeman J]]
[[Category: protein structure initiative]]
[[Category: Sauder JM]]
[[Category: psi-2]]
[[Category: Smith D]]
[[Category: structural genomic]]
[[Category: Sridhar V]]
[[Category: unknown function]]
[[Category: Wasserman S]]
 
[[Category: Wu B]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:06:31 2008''

Latest revision as of 12:07, 21 February 2024

Crystal structure of putative mandelate racemase from Mesorhizobium lotiCrystal structure of putative mandelate racemase from Mesorhizobium loti

Structural highlights

2oz8 is a 2 chain structure with sequence from Mesorhizobium japonicum MAFF 303099. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.48Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q987E0_RHILO

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2oz8, resolution 2.48Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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