2oz8: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2oz8.png|left|200px]]


{{STRUCTURE_2oz8|  PDB=2oz8  |  SCENE=  }}
==Crystal structure of putative mandelate racemase from Mesorhizobium loti==
 
<StructureSection load='2oz8' size='340' side='right'caption='[[2oz8]], [[Resolution|resolution]] 2.48&Aring;' scene=''>
===Crystal structure of putative mandelate racemase from Mesorhizobium loti===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[2oz8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mesorhizobium_japonicum_MAFF_303099 Mesorhizobium japonicum MAFF 303099]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OZ8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OZ8 FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.48&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
[[2oz8]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Mesorhizobium_loti_maff303099 Mesorhizobium loti maff303099]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OZ8 OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2oz8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oz8 OCA], [https://pdbe.org/2oz8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2oz8 RCSB], [https://www.ebi.ac.uk/pdbsum/2oz8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2oz8 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2oz8 TOPSAN]</span></td></tr>
[[Category: Mesorhizobium loti maff303099]]
</table>
[[Category: Almo, S C.]]
== Function ==
[[Category: Bain, K T.]]
[https://www.uniprot.org/uniprot/Q987E0_RHILO Q987E0_RHILO]  
[[Category: Bonanno, J B.]]
== Evolutionary Conservation ==
[[Category: Burley, S K.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Freeman, J.]]
Check<jmol>
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
  <jmolCheckbox>
[[Category: Sauder, J M.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oz/2oz8_consurf.spt"</scriptWhenChecked>
[[Category: Smith, D.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Sridhar, V.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Wasserman, S.]]
  </jmolCheckbox>
[[Category: Wu, B.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2oz8 ConSurf].
[[Category: New york sgx research center for structural genomic]]
<div style="clear:both"></div>
[[Category: Nysgxrc]]
__TOC__
[[Category: Protein structure initiative]]
</StructureSection>
[[Category: Psi-2]]
[[Category: Large Structures]]
[[Category: Structural genomic]]
[[Category: Mesorhizobium japonicum MAFF 303099]]
[[Category: Unknown function]]
[[Category: Almo SC]]
[[Category: Bain KT]]
[[Category: Bonanno JB]]
[[Category: Burley SK]]
[[Category: Freeman J]]
[[Category: Sauder JM]]
[[Category: Smith D]]
[[Category: Sridhar V]]
[[Category: Wasserman S]]
[[Category: Wu B]]

Latest revision as of 12:07, 21 February 2024

Crystal structure of putative mandelate racemase from Mesorhizobium lotiCrystal structure of putative mandelate racemase from Mesorhizobium loti

Structural highlights

2oz8 is a 2 chain structure with sequence from Mesorhizobium japonicum MAFF 303099. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.48Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q987E0_RHILO

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2oz8, resolution 2.48Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA