2ow4: Difference between revisions

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-{{Seed}}
-[[Image:2ow4.png|left|200px]]
-<!--
+==Crystal structure of a lectin from Canavalia maritima seeds (ConM) in complex with man1-2man-OMe==
-The line below this paragraph, containing "STRUCTURE_2ow4", creates the "Structure Box" on the page.
+<StructureSection load='2ow4' size='340' side='right'caption='[[2ow4]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2ow4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Canavalia_rosea Canavalia rosea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OW4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OW4 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=MMA:O1-METHYL-MANNOSE'>MMA</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
-{{STRUCTURE_2ow4|  PDB=2ow4  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ow4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ow4 OCA], [https://pdbe.org/2ow4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ow4 RCSB], [https://www.ebi.ac.uk/pdbsum/2ow4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ow4 ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/CONA_CANRO CONA_CANRO] Glucose/D-mannose specific lectin.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ow/2ow4_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ow4 ConSurf].
+<div style="clear:both"></div>
-===Crystal structure of a lectin from Canavalia maritima seeds (ConM) in complex with man1-2man-OMe===
+==See Also==
+*[[Concanavalin 3D structures|Concanavalin 3D structures]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_17881248}}, adds the Publication Abstract to the page
+[[Category: Canavalia rosea]]
-(as it appears on PubMed at http://www.pubmed.gov), where 17881248 is the PubMed ID number.
+[[Category: Large Structures]]
--->
+[[Category: Benevides RG]]
-{{ABSTRACT_PUBMED_17881248}}
+[[Category: Bezerra GA]]
+[[Category: Cavada BS]]
-==About this Structure==
+[[Category: Delatorre P]]
-Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OW4 OCA].
+[[Category: Moreno FBMB]]
+[[Category: Da Rocha BAM]]
-==Reference==
+[[Category: De Azevedo Jr WF]]
-Structural analysis of Canavalia maritima and Canavalia gladiata lectins complexed with different dimannosides: new insights into the understanding of the structure-biological activity relationship in legume lectins., Bezerra GA, Oliveira TM, Moreno FB, de Souza EP, da Rocha BA, Benevides RG, Delatorre P, de Azevedo WF Jr, Cavada BS, J Struct Biol. 2007 Nov;160(2):168-76. Epub 2007 Aug 16. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17881248 17881248]
+[[Category: De Oliveira TM]]
-[[Category: Benevides, R G.]]
+[[Category: De Souza EM]]
-[[Category: Bezerra, G A.]]
-[[Category: Cavada, B S.]]
-[[Category: Delatorre, P.]]
-[[Category: Jr., W F.de Azevedo.]]
-[[Category: Moreno, F B.M B.]]
-[[Category: Oliveira, T M.de.]]
-[[Category: Rocha, B A.M da.]]
-[[Category: Souza, E M.de.]]
-[[Category: Canavalia maritima]]
-[[Category: Lectin]]
-[[Category: Man1-2man-ome]]
-[[Category: Sugar binding protein]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Jul 27 17:44:12 2008''