2nck: Difference between revisions

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-{{Seed}}
-[[Image:2nck.png|left|200px]]
-<!--
+==CRYSTAL STRUCTURE OF MYXOCOCCUS XANTHUS NUCLEOSIDE DIPHOSPHATE KINASE AND ITS INTERACTION WITH A NUCLEOTIDE SUBSTRATE AT 2.0 ANGSTROMS RESOLUTION==
-The line below this paragraph, containing "STRUCTURE_2nck", creates the "Structure Box" on the page.
+<StructureSection load='2nck' size='340' side='right'caption='[[2nck]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2nck]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Myxococcus_xanthus Myxococcus xanthus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NCK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NCK FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
--->
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2nck FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nck OCA], [https://pdbe.org/2nck PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2nck RCSB], [https://www.ebi.ac.uk/pdbsum/2nck PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2nck ProSAT]</span></td></tr>
-{{STRUCTURE_2nck|  PDB=2nck  |  SCENE=  }}
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/NDK_MYXXA NDK_MYXXA] Major role in the synthesis of nucleoside triphosphates other than ATP.[HAMAP-Rule:MF_00451]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nc/2nck_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2nck ConSurf].
+<div style="clear:both"></div>
-===CRYSTAL STRUCTURE OF MYXOCOCCUS XANTHUS NUCLEOSIDE DIPHOSPHATE KINASE AND ITS INTERACTION WITH A NUCLEOTIDE SUBSTRATE AT 2.0 ANGSTROMS RESOLUTION===
+==See Also==
+*[[Nucleoside diphosphate kinase 3D structures|Nucleoside diphosphate kinase 3D structures]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_8263923}}, adds the Publication Abstract to the page
+[[Category: Large Structures]]
-(as it appears on PubMed at http://www.pubmed.gov), where 8263923 is the PubMed ID number.
--->
-{{ABSTRACT_PUBMED_8263923}}
-==About this Structure==
-NCK is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Myxococcus_xanthus Myxococcus xanthus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NCK OCA].
-==Reference==
-Crystal structure of Myxococcus xanthus nucleoside diphosphate kinase and its interaction with a nucleotide substrate at 2.0 A resolution., Williams RL, Oren DA, Munoz-Dorado J, Inouye S, Inouye M, Arnold E, J Mol Biol. 1993 Dec 20;234(4):1230-47. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/8263923 8263923]
 [[Category: Myxococcus xanthus]]
-[[Category: Nucleoside-diphosphate kinase]]
+[[Category: Arnold E]]
-[[Category: Single protein]]
+[[Category: Oren DA]]
-[[Category: Arnold, E.]]
+[[Category: Williams RL]]
-[[Category: Oren, D A.]]
-[[Category: Williams, R L.]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 15:15:08 2008''