2ioh: Difference between revisions

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-{{Seed}}
-[[Image:2ioh.png|left|200px]]
-<!--
+==Crystal structure of phosphonoacetaldehyde hydrolase with a K53R mutation==
-The line below this paragraph, containing "STRUCTURE_2ioh", creates the "Structure Box" on the page.
+<StructureSection load='2ioh' size='340' side='right'caption='[[2ioh]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2ioh]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_cereus Bacillus cereus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IOH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IOH FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-{{STRUCTURE_2ioh|  PDB=2ioh  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ioh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ioh OCA], [https://pdbe.org/2ioh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ioh RCSB], [https://www.ebi.ac.uk/pdbsum/2ioh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ioh ProSAT]</span></td></tr>
+</table>
-===Crystal structure of phosphonoacetaldehyde hydrolase with a K53R mutation===
+== Function ==
+[https://www.uniprot.org/uniprot/PHNX_BACCE PHNX_BACCE] Involved in phosphonate degradation.
+== Evolutionary Conservation ==
-<!--
+[[Image:Consurf_key_small.gif|200px|right]]
-The line below this paragraph, {{ABSTRACT_PUBMED_17070898}}, adds the Publication Abstract to the page
+Check<jmol>
-(as it appears on PubMed at http://www.pubmed.gov), where 17070898 is the PubMed ID number.
+  <jmolCheckbox>
--->
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/io/2ioh_consurf.spt"</scriptWhenChecked>
-{{ABSTRACT_PUBMED_17070898}}
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
-==About this Structure==
+  </jmolCheckbox>
-IOH is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Bacillus_cereus Bacillus cereus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IOH OCA].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ioh ConSurf].
+<div style="clear:both"></div>
-==Reference==
+__TOC__
-<ref group="xtra">PMID:17070898</ref><references group="xtra"/>
+</StructureSection>
 [[Category: Bacillus cereus]]
-[[Category: Allen, K A.]]
+[[Category: Large Structures]]
-[[Category: Dunaway-Mariano, D.]]
+[[Category: Allen KA]]
-[[Category: Lahiri, S D.]]
+[[Category: Dunaway-Mariano D]]
-[[Category: Peisach, E.]]
+[[Category: Lahiri SD]]
-[[Category: Zhang, G.]]
+[[Category: Peisach E]]
-[[Category: Haloacid dehalogenase superfamily]]
+[[Category: Zhang G]]
-[[Category: Phosphonoacetaldehyde hydrolase]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 13:22:35 2009''