2im5: Difference between revisions
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New page: left|200px<br /><applet load="2im5" size="350" color="white" frame="true" align="right" spinBox="true" caption="2im5, resolution 2.20Å" /> '''Crystal structure of... |
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== | ==Crystal structure of Nicotinate phosphoribosyltransferase from Porphyromonas Gingivalis== | ||
<StructureSection load='2im5' size='340' side='right'caption='[[2im5]], [[Resolution|resolution]] 2.20Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[2im5]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Porphyromonas_gingivalis Porphyromonas gingivalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IM5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IM5 FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2Å</td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2im5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2im5 OCA], [https://pdbe.org/2im5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2im5 RCSB], [https://www.ebi.ac.uk/pdbsum/2im5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2im5 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2im5 TOPSAN]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/Q7MXV0_PORGI Q7MXV0_PORGI] Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP.[HAMAP-Rule:MF_00570] | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/im/2im5_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2im5 ConSurf]. | |||
<div style="clear:both"></div> | |||
==See Also== | |||
*[[Phosphoribosyltransferase 3D structures|Phosphoribosyltransferase 3D structures]] | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Large Structures]] | |||
[[Category: Porphyromonas gingivalis]] | [[Category: Porphyromonas gingivalis]] | ||
[[Category: Almo SC]] | |||
[[Category: Almo | [[Category: Burley SK]] | ||
[[Category: Burley | [[Category: Fedorov AA]] | ||
[[Category: Fedorov | [[Category: Fedorov EV]] | ||
[[Category: Fedorov | [[Category: Sauder JM]] | ||
[[Category: Sauder | |||
Latest revision as of 12:03, 21 February 2024
Crystal structure of Nicotinate phosphoribosyltransferase from Porphyromonas GingivalisCrystal structure of Nicotinate phosphoribosyltransferase from Porphyromonas Gingivalis
Structural highlights
FunctionQ7MXV0_PORGI Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP.[HAMAP-Rule:MF_00570] Evolutionary Conservation Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf. See Also |
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