2i5r: Difference between revisions

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-[[Image:2i5r.png|left|200px]]
-{{STRUCTURE_2i5r|  PDB=2i5r  |  SCENE=  }}
+==Structure of small Toprim domain-containing protein from B. stearothermophilus in complex with Mg2+==
+<StructureSection load='2i5r' size='340' side='right'caption='[[2i5r]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
-===Structure of small Toprim domain-containing protein from B. stearothermophilus in complex with Mg2+===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[2i5r]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I5R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2I5R FirstGlance]. <br>
-{{ABSTRACT_PUBMED_17705269}}
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-==About this Structure==
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2i5r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i5r OCA], [https://pdbe.org/2i5r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2i5r RCSB], [https://www.ebi.ac.uk/pdbsum/2i5r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2i5r ProSAT], [https://www.topsan.org/Proteins/MCSG/2i5r TOPSAN]</span></td></tr>
-[[2i5r]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I5R OCA].
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q5KVJ9_GEOKA Q5KVJ9_GEOKA]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i5/2i5r_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2i5r ConSurf].
+<div style="clear:both"></div>
 ==See Also==
 *[[TOPRIM domain protein|TOPRIM domain protein]]
+__TOC__
-==Reference==
+</StructureSection>
-<ref group="xtra">PMID:017705269</ref><references group="xtra"/>
 [[Category: Geobacillus stearothermophilus]]
-[[Category: Borek, D.]]
+[[Category: Large Structures]]
-[[Category: Joachimiak, A.]]
+[[Category: Borek D]]
-[[Category: MCSG, Midwest Center for Structural Genomics.]]
+[[Category: Joachimiak A]]
-[[Category: Moy, S F.]]
+[[Category: Moy SF]]
-[[Category: Otwinowski, Z.]]
+[[Category: Otwinowski Z]]
-[[Category: Rezacova, P.]]
+[[Category: Rezacova P]]
-[[Category: Mcsg]]
-[[Category: Midwest center for structural genomic]]
-[[Category: Protein structure initiative]]
-[[Category: Psi-2]]
-[[Category: Structural genomic]]
-[[Category: Toprim domain]]
-[[Category: Unknown function]]