2hoo: Difference between revisions

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-{{Seed}}
-[[Image:2hoo.png|left|200px]]
-<!--
+==Crystal structure of an E. coli thi-box riboswitch bound to benfotiamine==
-The line below this paragraph, containing "STRUCTURE_2hoo", creates the "Structure Box" on the page.
+<StructureSection load='2hoo' size='340' side='right'caption='[[2hoo]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2hoo]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HOO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HOO FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BFT:S-BENZOYLTHIAMINE+O-MONOPHOSPHATE'>BFT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
-{{STRUCTURE_2hoo|  PDB=2hoo  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2hoo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hoo OCA], [https://pdbe.org/2hoo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2hoo RCSB], [https://www.ebi.ac.uk/pdbsum/2hoo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2hoo ProSAT]</span></td></tr>
+</table>
-===Crystal structure of an E. coli thi-box riboswitch bound to benfotiamine===
+==See Also==
+*[[Riboswitch 3D structures|Riboswitch 3D structures]]
+*[[Ribozyme 3D structures|Ribozyme 3D structures]]
-<!--
+__TOC__
-The line below this paragraph, {{ABSTRACT_PUBMED_16962976}}, adds the Publication Abstract to the page
+</StructureSection>
-(as it appears on PubMed at http://www.pubmed.gov), where 16962976 is the PubMed ID number.
+[[Category: Escherichia coli]]
--->
+[[Category: Large Structures]]
-{{ABSTRACT_PUBMED_16962976}}
+[[Category: Edwards TE]]
+[[Category: Ferre-D'Amare AR]]
-==About this Structure==
-Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HOO OCA].
-==Reference==
-Crystal structures of the thi-box riboswitch bound to thiamine pyrophosphate analogs reveal adaptive RNA-small molecule recognition., Edwards TE, Ferre-D'Amare AR, Structure. 2006 Sep;14(9):1459-68. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16962976 16962976]
-[[Category: Amare, A R.Ferre-D.]]
-[[Category: Edwards, T E.]]
-[[Category: Benfotiamine]]
-[[Category: Riboswitch]]
-[[Category: Rna]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 17:04:05 2008''