2hj1: Difference between revisions

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-[[Image:2hj1.gif|left|200px]]<br /><applet load="2hj1" size="450" color="white" frame="true" align="right" spinBox="true"
-caption="2hj1, resolution 2.100&Aring;" />
-'''Crystal structure of a 3D domain-swapped dimer of protein HI0395 from Haemophilus influenzae'''<br />
-==About this Structure==
+==Crystal structure of a 3D domain-swapped dimer of protein HI0395 from Haemophilus influenzae==
-HJ1 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Haemophilus_influenzae Haemophilus influenzae] with SO4 as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2HJ1 OCA].
+<StructureSection load='2hj1' size='340' side='right'caption='[[2hj1]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-[[Category: Haemophilus influenzae]]
+== Structural highlights ==
-[[Category: Single protein]]
+<table><tr><td colspan='2'>[[2hj1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Haemophilus_influenzae_86-028NP Haemophilus influenzae 86-028NP]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HJ1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HJ1 FirstGlance]. <br>
-[[Category: Almo, S.C.]]
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-[[Category: Burley, S.K.]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-[[Category: NYSGXRC, New.York.Structural.GenomiX.Research.Consortium.]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2hj1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hj1 OCA], [https://pdbe.org/2hj1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2hj1 RCSB], [https://www.ebi.ac.uk/pdbsum/2hj1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2hj1 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2hj1 TOPSAN]</span></td></tr>
-[[Category: Patskovsky, Y.V.]]
+</table>
-[[Category: Ramagopal, U.A.]]
+== Function ==
-[[Category: Toro, R.]]
+[https://www.uniprot.org/uniprot/RNFH_HAEI8 RNFH_HAEI8]
-[[Category: SO4]]
+== Evolutionary Conservation ==
-[[Category: new york structural genomix research consortium]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: nysgxrc]]
+Check<jmol>
-[[Category: protein structure initiative]]
+  <jmolCheckbox>
-[[Category: psi]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hj/2hj1_consurf.spt"</scriptWhenChecked>
-[[Category: structural genomics]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
-''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 11:48:14 2007''
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2hj1 ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
+[[Category: Haemophilus influenzae 86-028NP]]
+[[Category: Large Structures]]
+[[Category: Almo SC]]
+[[Category: Burley SK]]
+[[Category: Patskovsky YV]]
+[[Category: Ramagopal UA]]
+[[Category: Toro R]]