2haf: Difference between revisions

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-{{Seed}}
-[[Image:2haf.png|left|200px]]
-<!--
+==Crystal structure of a putative translation repressor from Vibrio cholerae==
-The line below this paragraph, containing "STRUCTURE_2haf", creates the "Structure Box" on the page.
+<StructureSection load='2haf' size='340' side='right'caption='[[2haf]], [[Resolution|resolution]] 2.88&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2haf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HAF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HAF FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.88&#8491;</td></tr>
--->
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2haf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2haf OCA], [https://pdbe.org/2haf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2haf RCSB], [https://www.ebi.ac.uk/pdbsum/2haf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2haf ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2haf TOPSAN]</span></td></tr>
-{{STRUCTURE_2haf|  PDB=2haf  |  SCENE=  }}
+</table>
+== Function ==
-===Crystal structure of a putative translation repressor from Vibrio cholerae===
+[https://www.uniprot.org/uniprot/Y467_VIBCH Y467_VIBCH]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
-==About this Structure==
+Check<jmol>
-HAF is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HAF OCA].
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ha/2haf_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2haf ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
 [[Category: Vibrio cholerae]]
-[[Category: Burley, S K.]]
+[[Category: Burley SK]]
-[[Category: Kumaran, D.]]
+[[Category: Kumaran D]]
-[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+[[Category: Seetharaman J]]
-[[Category: Seetharaman, J.]]
+[[Category: Sugadev R]]
-[[Category: Sugadev, R.]]
+[[Category: Swaminathan S]]
-[[Category: Swaminathan, S.]]
-[[Category: Alpha/beta]]
-[[Category: New york structural genomix research consortium]]
-[[Category: Nysgxrc]]
-[[Category: Protein structure initiative]]
-[[Category: Psi]]
-[[Category: Structural genomic]]
-[[Category: Translation repressor]]
-[[Category: X-ray crystallography]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 17:10:27 2008''