2gu3: Difference between revisions

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New page: left|200px<br /><applet load="2gu3" size="450" color="white" frame="true" align="right" spinBox="true" caption="2gu3, resolution 1.74Å" /> '''YpmB protein from Ba...
 
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[[Image:2gu3.gif|left|200px]]<br /><applet load="2gu3" size="450" color="white" frame="true" align="right" spinBox="true"
caption="2gu3, resolution 1.74&Aring;" />
'''YpmB protein from Bacillus subtilis'''<br />


==About this Structure==
==YpmB protein from Bacillus subtilis==
2GU3 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis] with NI as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2GU3 OCA].  
<StructureSection load='2gu3' size='340' side='right'caption='[[2gu3]], [[Resolution|resolution]] 1.74&Aring;' scene=''>
[[Category: Bacillus subtilis]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[2gu3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis_subsp._subtilis_str._168 Bacillus subtilis subsp. subtilis str. 168]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GU3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GU3 FirstGlance]. <br>
[[Category: Dementieva, I.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.74&#8491;</td></tr>
[[Category: Joachimiak, A.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
[[Category: MCSG, Midwest.Center.for.Structural.Genomics.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gu3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gu3 OCA], [https://pdbe.org/2gu3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gu3 RCSB], [https://www.ebi.ac.uk/pdbsum/2gu3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gu3 ProSAT], [https://www.topsan.org/Proteins/MCSG/2gu3 TOPSAN]</span></td></tr>
[[Category: Maltseva, N.]]
</table>
[[Category: Moy, S.]]
== Function ==
[[Category: Osipiuk, J.]]
[https://www.uniprot.org/uniprot/YPMB_BACSU YPMB_BACSU]  
[[Category: NI]]
== Evolutionary Conservation ==
[[Category: apc1927]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: mcsg]]
Check<jmol>
[[Category: midwest center for structural genomics]]
  <jmolCheckbox>
[[Category: protein structure initiative]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gu/2gu3_consurf.spt"</scriptWhenChecked>
[[Category: psi]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: structural genomics]]
    <text>to colour the structure by Evolutionary Conservation</text>
 
  </jmolCheckbox>
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 11:23:30 2007''
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gu3 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Bacillus subtilis subsp. subtilis str. 168]]
[[Category: Large Structures]]
[[Category: Dementieva I]]
[[Category: Joachimiak A]]
[[Category: Maltseva N]]
[[Category: Moy S]]
[[Category: Osipiuk J]]

Latest revision as of 12:29, 14 February 2024

YpmB protein from Bacillus subtilisYpmB protein from Bacillus subtilis

Structural highlights

2gu3 is a 1 chain structure with sequence from Bacillus subtilis subsp. subtilis str. 168. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.74Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

YPMB_BACSU

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2gu3, resolution 1.74Å

Drag the structure with the mouse to rotate

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OCA