2gu3: Difference between revisions

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[[Image:2gu3.png|left|200px]]


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==YpmB protein from Bacillus subtilis==
The line below this paragraph, containing "STRUCTURE_2gu3", creates the "Structure Box" on the page.
<StructureSection load='2gu3' size='340' side='right'caption='[[2gu3]], [[Resolution|resolution]] 1.74&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2gu3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis_subsp._subtilis_str._168 Bacillus subtilis subsp. subtilis str. 168]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GU3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GU3 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.74&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
{{STRUCTURE_2gu3|  PDB=2gu3  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gu3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gu3 OCA], [https://pdbe.org/2gu3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gu3 RCSB], [https://www.ebi.ac.uk/pdbsum/2gu3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gu3 ProSAT], [https://www.topsan.org/Proteins/MCSG/2gu3 TOPSAN]</span></td></tr>
 
</table>
===YpmB protein from Bacillus subtilis===
== Function ==
 
[https://www.uniprot.org/uniprot/YPMB_BACSU YPMB_BACSU]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
2GU3 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GU3 OCA].  
Check<jmol>
[[Category: Bacillus subtilis]]
  <jmolCheckbox>
[[Category: Single protein]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gu/2gu3_consurf.spt"</scriptWhenChecked>
[[Category: Dementieva, I.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Joachimiak, A.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
  </jmolCheckbox>
[[Category: Maltseva, N.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gu3 ConSurf].
[[Category: Moy, S.]]
<div style="clear:both"></div>
[[Category: Osipiuk, J.]]
__TOC__
[[Category: Apc1927]]
</StructureSection>
[[Category: Mcsg]]
[[Category: Bacillus subtilis subsp. subtilis str. 168]]
[[Category: Midwest center for structural genomic]]
[[Category: Large Structures]]
[[Category: Protein structure initiative]]
[[Category: Dementieva I]]
[[Category: Psi]]
[[Category: Joachimiak A]]
[[Category: Structural genomic]]
[[Category: Maltseva N]]
 
[[Category: Moy S]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 29 04:05:33 2008''
[[Category: Osipiuk J]]

Latest revision as of 12:29, 14 February 2024

YpmB protein from Bacillus subtilisYpmB protein from Bacillus subtilis

Structural highlights

2gu3 is a 1 chain structure with sequence from Bacillus subtilis subsp. subtilis str. 168. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.74Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

YPMB_BACSU

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2gu3, resolution 1.74Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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