2gqs: Difference between revisions

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-{{Seed}}
-[[Image:2gqs.png|left|200px]]
-<!--
+==SAICAR Synthetase Complexed with CAIR-Mg2+ and ADP==
-The line below this paragraph, containing "STRUCTURE_2gqs", creates the "Structure Box" on the page.
+<StructureSection load='2gqs' size='340' side='right'caption='[[2gqs]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2gqs]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GQS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GQS FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=C2R:5-AMINO-1-(5-O-PHOSPHONO-BETA-D-RIBOFURANOSYL)-1H-IMIDAZOLE-4-CARBOXYLIC+ACID'>C2R</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-{{STRUCTURE_2gqs|  PDB=2gqs  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gqs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gqs OCA], [https://pdbe.org/2gqs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gqs RCSB], [https://www.ebi.ac.uk/pdbsum/2gqs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gqs ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/PUR7_ECOLI PUR7_ECOLI]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gq/2gqs_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gqs ConSurf].
+<div style="clear:both"></div>
-===SAICAR Synthetase Complexed with CAIR-Mg2+ and ADP===
+==See Also==
+*[[SAICAR synthetase|SAICAR synthetase]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_16687397}}, adds the Publication Abstract to the page
-(as it appears on PubMed at http://www.pubmed.gov), where 16687397 is the PubMed ID number.
--->
-{{ABSTRACT_PUBMED_16687397}}
-==About this Structure==
-GQS is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GQS OCA].
-==Reference==
-Nucleotide complexes of Escherichia coli phosphoribosylaminoimidazole succinocarboxamide synthetase., Ginder ND, Binkowski DJ, Fromm HJ, Honzatko RB, J Biol Chem. 2006 Jul 28;281(30):20680-8. Epub 2006 May 9. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16687397 16687397]
 [[Category: Escherichia coli]]
-[[Category: Phosphoribosylaminoimidazolesuccinocarboxamide synthase]]
+[[Category: Large Structures]]
-[[Category: Single protein]]
+[[Category: Ginder ND]]
-[[Category: Ginder, N D.]]
+[[Category: Honzatko RB]]
-[[Category: Honzatko, R B.]]
-[[Category: Ade1]]
-[[Category: Ade2]]
-[[Category: Magnesium coordination]]
-[[Category: Metal coordination]]
-[[Category: Nucleotide complex]]
-[[Category: Purc]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 17:23:48 2008''