2gqd: Difference between revisions

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 ==The crystal structure of B-ketoacyl-ACP synthase II (FabF) from Staphylococcus aureus==
-<StructureSection load='2gqd' size='340' side='right' caption='[[2gqd]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
+<StructureSection load='2gqd' size='340' side='right'caption='[[2gqd]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[2gqd]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"micrococcus_aureus"_(rosenbach_1884)_zopf_1885 "micrococcus aureus" (rosenbach 1884) zopf 1885]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GQD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2GQD FirstGlance]. <br>
+<table><tr><td colspan='2'>[[2gqd]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GQD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GQD FirstGlance]. <br>
-</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">fabF ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 "Micrococcus aureus" (Rosenbach 1884) Zopf 1885])</td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Beta-ketoacyl-[acyl-carrier-protein]_synthase_I Beta-ketoacyl-[acyl-carrier-protein] synthase I], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.1.41 2.3.1.41] </span></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gqd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gqd OCA], [https://pdbe.org/2gqd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gqd RCSB], [https://www.ebi.ac.uk/pdbsum/2gqd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gqd ProSAT]</span></td></tr>
-<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gqd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gqd OCA], [http://pdbe.org/2gqd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2gqd RCSB], [http://www.ebi.ac.uk/pdbsum/2gqd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2gqd ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[http://www.uniprot.org/uniprot/FABF_STAAW FABF_STAAW]] Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP (By similarity).
+[https://www.uniprot.org/uniprot/FABF_STAAW FABF_STAAW] Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP (By similarity).
 == Evolutionary Conservation ==
 [[Image:Consurf_key_small.gif|200px|right]]
 Check<jmol>
    <jmolCheckbox>
-     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gq/2gqd_consurf.spt"</scriptWhenChecked>
+     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gq/2gqd_consurf.spt"</scriptWhenChecked>
      <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
      <text>to colour the structure by Evolutionary Conservation</text>
@@ Line 20: / Line 19: @@
 </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gqd ConSurf].
 <div style="clear:both"></div>
+==See Also==
+*[[Acyl carrier protein synthase 3D structures|Acyl carrier protein synthase 3D structures]]
 __TOC__
 </StructureSection>
-[[Category: Miller, D J]]
+[[Category: Large Structures]]
-[[Category: Rock, C O]]
+[[Category: Staphylococcus aureus]]
-[[Category: White, S W]]
+[[Category: Miller DJ]]
-[[Category: Zhang, Y M]]
+[[Category: Rock CO]]
-[[Category: Duplicated babababb fold]]
+[[Category: White SW]]
-[[Category: Transferase]]
+[[Category: Zhang YM]]