2gjv: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-[[Image:2gjv.gif|left|200px]]
-<!--
+==Crystal Structure of a Protein of Unknown Function from Salmonella typhimurium==
-The line below this paragraph, containing "STRUCTURE_2gjv", creates the "Structure Box" on the page.
+<StructureSection load='2gjv' size='340' side='right'caption='[[2gjv]], [[Resolution|resolution]] 2.39&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2gjv]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium Salmonella enterica subsp. enterica serovar Typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GJV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GJV FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.39&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
-{{STRUCTURE_2gjv|  PDB=2gjv  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gjv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gjv OCA], [https://pdbe.org/2gjv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gjv RCSB], [https://www.ebi.ac.uk/pdbsum/2gjv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gjv ProSAT], [https://www.topsan.org/Proteins/MCSG/2gjv TOPSAN]</span></td></tr>
+</table>
-'''Crystal Structure of a Protein of Unknown Function from Salmonella typhimurium'''
+== Function ==
+[https://www.uniprot.org/uniprot/Q8ZKJ0_SALTY Q8ZKJ0_SALTY]
+== Evolutionary Conservation ==
-==About this Structure==
+[[Image:Consurf_key_small.gif|200px|right]]
-GJV is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Salmonella_typhimurium Salmonella typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GJV OCA].
+Check<jmol>
-[[Category: Salmonella typhimurium]]
+  <jmolCheckbox>
-[[Category: Single protein]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gj/2gjv_consurf.spt"</scriptWhenChecked>
-[[Category: Anderson, W F.]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: Brunzelle, J S.]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Collart, F R.]]
+  </jmolCheckbox>
-[[Category: MCSG, Midwest Center for Structural Genomics.]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gjv ConSurf].
-[[Category: Minasov, G.]]
+<div style="clear:both"></div>
-[[Category: Shuvalova, L.]]
+__TOC__
-[[Category: Vorontsov, I I.]]
+</StructureSection>
-[[Category: Crystal structure]]
+[[Category: Large Structures]]
-[[Category: Mcsg]]
+[[Category: Salmonella enterica subsp. enterica serovar Typhimurium]]
-[[Category: Midwest center for structural genomic]]
+[[Category: Anderson WF]]
-[[Category: Protein structure initiative]]
+[[Category: Brunzelle JS]]
-[[Category: Psi]]
+[[Category: Collart FR]]
-[[Category: Structural genomic]]
+[[Category: Joachimiak A]]
-[[Category: Unknown function]]
+[[Category: Minasov G]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 05:11:21 2008''
+[[Category: Shuvalova L]]
+[[Category: Vorontsov II]]