2gis: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-{{Seed}}
-[[Image:2gis.png|left|200px]]
-<!--
+==Structure of the S-adenosylmethionine riboswitch mRNA regulatory element==
-The line below this paragraph, containing "STRUCTURE_2gis", creates the "Structure Box" on the page.
+<StructureSection load='2gis' size='340' side='right'caption='[[2gis]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2gis]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Caldanaerobacter_subterraneus_subsp._tengcongensis Caldanaerobacter subterraneus subsp. tengcongensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GIS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GIS FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IRI:IRIDIUM+HEXAMMINE+ION'>IRI</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene></td></tr>
-{{STRUCTURE_2gis|  PDB=2gis  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gis FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gis OCA], [https://pdbe.org/2gis PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gis RCSB], [https://www.ebi.ac.uk/pdbsum/2gis PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gis ProSAT]</span></td></tr>
+</table>
-===Structure of the S-adenosylmethionine riboswitch mRNA regulatory element===
+==See Also==
+*[[Kink-turn motif|Kink-turn motif]]
+*[[Riboswitch 3D structures|Riboswitch 3D structures]]
-<!--
+*[[User:Wayne Decatur/kink-turn motif|User:Wayne Decatur/kink-turn motif]]
-The line below this paragraph, {{ABSTRACT_PUBMED_16810258}}, adds the Publication Abstract to the page
+__TOC__
-(as it appears on PubMed at http://www.pubmed.gov), where 16810258 is the PubMed ID number.
+</StructureSection>
--->
+[[Category: Caldanaerobacter subterraneus subsp. tengcongensis]]
-{{ABSTRACT_PUBMED_16810258}}
+[[Category: Large Structures]]
+[[Category: Batey RT]]
-==About this Structure==
+[[Category: Montange RK]]
-Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GIS OCA].
-==Reference==
-Structure of the S-adenosylmethionine riboswitch regulatory mRNA element., Montange RK, Batey RT, Nature. 2006 Jun 29;441(7097):1172-5. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16810258 16810258]
-[[Category: Batey, R T.]]
-[[Category: Montange, R K.]]
-[[Category: Mrna]]
-[[Category: Riboswitch]]
-[[Category: Rna-ligand complex]]
-[[Category: S-adenosylmethionine]]
-[[Category: Sam]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 00:28:02 2008''