2g86: Difference between revisions

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[[Image:2g86.png|left|200px]]


{{STRUCTURE_2g86|  PDB=2g86  |  SCENE=  }}
==L. casei thymidylate synthase Y261F in complex with substrate, dUMP==
 
<StructureSection load='2g86' size='340' side='right'caption='[[2g86]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
===L. casei thymidylate synthase Y261F in complex with substrate, dUMP===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[2g86]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lacticaseibacillus_casei Lacticaseibacillus casei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G86 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2G86 FirstGlance]. <br>
{{ABSTRACT_PUBMED_16768437}}
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
 
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=UMP:2-DEOXYURIDINE+5-MONOPHOSPHATE'>UMP</scene></td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2g86 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g86 OCA], [https://pdbe.org/2g86 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2g86 RCSB], [https://www.ebi.ac.uk/pdbsum/2g86 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2g86 ProSAT]</span></td></tr>
[[2g86]] is a 1 chain structure of [[Thymidylate synthase]] with sequence from [http://en.wikipedia.org/wiki/Lactobacillus_casei Lactobacillus casei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G86 OCA].  
</table>
== Function ==
[https://www.uniprot.org/uniprot/TYSY_LACCA TYSY_LACCA] Provides the sole de novo source of dTMP for DNA biosynthesis.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g8/2g86_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2g86 ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Thymidylate synthase|Thymidylate synthase]]
*[[Thymidylate synthase 3D structures|Thymidylate synthase 3D structures]]
 
__TOC__
==Reference==
</StructureSection>
<ref group="xtra">PMID:016768437</ref><references group="xtra"/>
[[Category: Lacticaseibacillus casei]]
[[Category: Lactobacillus casei]]
[[Category: Large Structures]]
[[Category: Thymidylate synthase]]
[[Category: Finer-Moore JS]]
[[Category: Finer-Moore, J S.]]
[[Category: Stroud RM]]
[[Category: Stroud, R M.]]
[[Category: Dump complex]]
[[Category: Dump-binding residue]]
[[Category: Thymidylate synthase mutant]]
[[Category: Transferase]]

Latest revision as of 12:26, 14 February 2024

L. casei thymidylate synthase Y261F in complex with substrate, dUMPL. casei thymidylate synthase Y261F in complex with substrate, dUMP

Structural highlights

2g86 is a 1 chain structure with sequence from Lacticaseibacillus casei. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.4Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

TYSY_LACCA Provides the sole de novo source of dTMP for DNA biosynthesis.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2g86, resolution 2.40Å

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