2g4z: Difference between revisions

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-{{Seed}}
-[[Image:2g4z.png|left|200px]]
-<!--
+==anomalous substructure of thermolysin==
-The line below this paragraph, containing "STRUCTURE_2g4z", creates the "Structure Box" on the page.
+<StructureSection load='2g4z' size='340' side='right'caption='[[2g4z]], [[Resolution|resolution]] 1.98&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2g4z]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_thermoproteolyticus Bacillus thermoproteolyticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G4Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2G4Z FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.98&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-{{STRUCTURE_2g4z|  PDB=2g4z  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2g4z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2g4z OCA], [https://pdbe.org/2g4z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2g4z RCSB], [https://www.ebi.ac.uk/pdbsum/2g4z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2g4z ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/THER_BACTH THER_BACTH] Extracellular zinc metalloprotease.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g4/2g4z_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2g4z ConSurf].
+<div style="clear:both"></div>
-===anomalous substructure of thermolysin===
+==See Also==
+*[[Thermolysin 3D structures|Thermolysin 3D structures]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_17327674}}, adds the Publication Abstract to the page
-(as it appears on PubMed at http://www.pubmed.gov), where 17327674 is the PubMed ID number.
--->
-{{ABSTRACT_PUBMED_17327674}}
-==About this Structure==
-G4Z is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_thermoproteolyticus Bacillus thermoproteolyticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2G4Z OCA].
-==Reference==
-<ref group="xtra">PMID:17327674</ref><references group="xtra"/>
 [[Category: Bacillus thermoproteolyticus]]
-[[Category: Thermolysin]]
+[[Category: Large Structures]]
-[[Category: Mueller-Dieckmann, C.]]
+[[Category: Mueller-Dieckmann C]]
-[[Category: Weiss, M S.]]
+[[Category: Weiss MS]]
-[[Category: Anomalous substructure of thermolysin]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 05:25:12 2009''