2fi1: Difference between revisions

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-[[Image:2fi1.gif|left|200px]]<br /><applet load="2fi1" size="350" color="white" frame="true" align="right" spinBox="true"
-caption="2fi1, resolution 1.40&Aring;" />
-'''The crystal structure of a hydrolase from Streptococcus pneumoniae TIGR4'''<br />
-==About this Structure==
+==The crystal structure of a hydrolase from Streptococcus pneumoniae TIGR4==
-FI1 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_pneumoniae Streptococcus pneumoniae] with <scene name='pdbligand=CA:'>CA</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FI1 OCA].
+<StructureSection load='2fi1' size='340' side='right'caption='[[2fi1]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
-[[Category: Single protein]]
+== Structural highlights ==
-[[Category: Streptococcus pneumoniae]]
+<table><tr><td colspan='2'>[[2fi1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae_TIGR4 Streptococcus pneumoniae TIGR4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FI1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FI1 FirstGlance]. <br>
-[[Category: Abdullah, J.]]
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4&#8491;</td></tr>
-[[Category: Collart, F.]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
-[[Category: Joachimiak, A.]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fi1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fi1 OCA], [https://pdbe.org/2fi1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fi1 RCSB], [https://www.ebi.ac.uk/pdbsum/2fi1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fi1 ProSAT], [https://www.topsan.org/Proteins/MCSG/2fi1 TOPSAN]</span></td></tr>
-[[Category: MCSG, Midwest.Center.for.Structural.Genomics.]]
+</table>
-[[Category: Zhang, R.]]
+== Function ==
-[[Category: Zhou, M.]]
+[https://www.uniprot.org/uniprot/A0A0H2UPC8_STRPN A0A0H2UPC8_STRPN]
-[[Category: CA]]
+== Evolutionary Conservation ==
-[[Category: haloacid dehalogenase-like family]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: hydrolase]]
+Check<jmol>
-[[Category: mcsg]]
+  <jmolCheckbox>
-[[Category: midwest center for structural genomics]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fi/2fi1_consurf.spt"</scriptWhenChecked>
-[[Category: protein structure initiative]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: psi]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: structural genomics]]
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fi1 ConSurf].
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 19:36:54 2008''
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
+[[Category: Streptococcus pneumoniae TIGR4]]
+[[Category: Abdullah J]]
+[[Category: Collart F]]
+[[Category: Joachimiak A]]
+[[Category: Zhang R]]
+[[Category: Zhou M]]